Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5126 |
Symbol | gltB |
ID | 5872941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5734088 |
End bp | 5738533 |
Gene Length | 4446 bp |
Protein Length | 1481 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641550264 |
Product | glutamate synthase subunit alpha |
Protein accession | YP_001671346 |
Protein GI | 167036115 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0069] Glutamate synthase domain 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.979784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAG GTCTGTACCA TCCCGAAGAA TTCAAGGACA ACTGTGGTTT TGGCCTGATC GCCCATATGA CGGGTGAACC GAGCCACCAC CTTCTGCAAA CCGCCATGCA GGCACTGACT TGCATGACCC ACCGCGGCGG CATCAACGCC GACGGCAAGA CCGGTGACGG TTGCGGTCTG CTTATGCAGA AGCCCGATCA ATTTCTGCGT GCCGTGGCCC AGGAACACTT CGCCGTCGAG CTGCCCAAGC AATACGCCGT CGGCATGGTG TTCTTCAACC AGGACCCGGT CAAAGCCGAA GCGGCTCGCG CCAACATGGA CCGCGAAATC CTCGCCGCTG GCCTGAAGCT GGTCGGCTGG CGCAAGGTGC CGATCGACAC CAGCGTGCTG GGCCGCCTGG CCCTGGAGCG TCTGCCGCAG ATCGAGCAGG TGTTCATCGG CGGTGAAGGC CTGAGCGACC AGGAATTCGC CATCAAGCTG TTCAGTGCCC GTCGCCGTTC GTCGGTGGCC AACGCCCACG ATAGCGACCA CTACATCTGC AGCTTCTCGC ACAAGACCAT CATCTACAAA GGCCTGATGA TGCCGCGCGA TCTCGCGGCG TTCTATCCAG ACCTGGGTGA CGAGCGCCTG CAAACCGCGA TCTGCGTGTT TCACCAGCGC TTCTCCACCA ACACCCTGCC GAAATGGCCG CTGGCGCAAC CGTTCCGCTT CCTCGCCCAC AACGGCGAGA TCAACACCAT CACCGGCAAC CGCAACTGGG CAATGGCCCG TCGCACCAAG TTCGCCAACG ACCAGATCCC CGACCTCGAA GAGCTTGGCC CGCTGGTCAA CCGCGTCGGT TCCGACTCGT CGAGCATGGA CAACATGCTG GAGTTGATGG TCACCGGTGG CATCGACCTG TTCCGCGGCG TGCGCATGCT GGTACCGCCA GCCTGGCAGA ACGTCGAGAC CATGGACGCC GACCTGCGCG CCTTCTACGA ATACAACTCC ATGCACATGG AGCCGTGGGA TGGCCCGGCC GGTATCGTCA TGACCGAAGG CCGCCACGCG GTGTGCCTGC TCGACCGCAA CGGCCTGCGC CCGGCGCGCT GGGTAACCAC CACCAACGGC TACATCACCA TCGCCTCGGA AATCGGCGTT TGGGGCTATC AGCCTGAGGA GGTGCTGGCC AAGGGCCGTG TCGGCCCAGG TCAAATCCTT GCCGTGGACA CCGAAACCGG CCAGATCCTC GACACCGACG CCATCGACAA CCGCCTTAAG TCGCGTCACC CGTACAAGCG CTGGCTGCGT CAGCACGCTA CCCGCATTCA GGCGACGCTG ACCGACGACC AGGGTGTGGC CAGCTACGAC GCTGACCAGC TCAAGCAATA CATGAAGATG TTCCAGGTCA CCTTCGAAGA GCGTGACCAG GTGCTGCGCC CGCTGGGTGA GCAGGGCCAG GAAGCCGTTG GCTCGATGGG TGACGACACG CCAATGGCCG TGCTGTCGCA GCGTGTGCGG TCGCCGTACG ATTTCTTCCG CCAGCAGTTC GCTCAGGTGA CCAACCCACC GATCGATCCG CTGCGTGAAG CGATCGTGAT GTCGCTGGAA ATCTGCCTGG GTGCCGAGCG CAACATCTTC CAGGAGTCCC CGGAGCACGC ATCGCGGGTC ATCCTCAGCT CGCCGGTCAT TTCGCCCGCC AAGTGGCGTT CGCTGATGAA CCTGGAGCGC GAAGGCTTCG ACCGCCAGCT GATCGACCTC AATTACGAGC AGGGCATCGG CCTGGAAGCG GCCATTCGCA ACATCGCCGA CCAGGCCGAA GAGGCTGTGC GCGCGGGCAA GACCCAGCTG GTGCTGAGCG ACCGTTATAT CGCCCCAGGC AAGCTGCCTG TGCATGCGTC GTTGGCCGTT GGTGCGGTGC ATCACCGCCT GACCGAGCAA GGCCTGCGTT GCGACAGCAA CATCCTGGTG GAAACCGCCA CCGCCCGTGA CCCGCATCAT TTCGCTGTGC TGCTGGGCTT CGGTGCCTCG GCCGTTTACC CGTACCTGGC GTATGAAGTA CTGGCCGACC TGATCCGCAC CGGCGAAGTG CTGGGCGACC TGGACGAAGT CTTCAAGTAC TACCGCAAAG GCATCTCCAA AGGCCTGCTG AAGATCCTGT CGAAGATGGG TATCTCCACC ATCGCCTCGT ACCGTGGTGC GCAGCTGTTC GAAGCCATCG GTTTGGCCGA AGAAGTGGTC GGTCTGAGCT TCAAGGGTGT GTCCAGCCGC ATCAAGGGGG CGCGTTTCGT TGACCTGGAA AGCGACCAGA AGCTGCTGGC GGCCGAAGCC TGGAGCGCGC GCAAGCCGAT TCAGCAAGGT GGCCTGCTGA AGTTCGTCCA CGGTGGCGAA TACCACGCTT ACAACCCGGA TGTGGTCAAC ACCCTGCAAG CCGCTGTGCA GCAGGGCGAC TACGCCAAGT TCAAGGAATA CACCACGCTG GTCGACCAGC GCCCGGTATC GATGATCCGC GACCTGCTGA AAGTGAAAGT GGCCGACCAG CCACTGGCGC TGGAGCAGAT CGAACCGCTG GAGGCTATCC TCAAGCGCTT CGATTCCGCC GGTATCTCGC TGGGCGCACT GTCGCCGGAA GCCCACGAAG CGTTGGCCGA AGCCATGAAC CGCCTGGGTG CGCGTTCCAA CTCCGGTGAG GGCGGTGAAG ACCCGTCGCG CTACGGCACC ATCAAGAGCT CGAAGATCAA GCAGGTGGCC ACCGGCCGCT TTGGTGTGAC CCCGGAATAC CTGGTCAACG CCGAGGTGCT GCAGATCAAG GTTGCCCAGG GCGCCAAGCC CGGTGAGGGC GGCCAGCTGC CGGGCGGCAA GGTCAACGGC CTGATCGCCA AGCTGCGCTA TGCGGTACCT GGCGTGACCC TGATCTCACC GCCGCCGCAC CACGATATCT ACTCGATCGA AGACCTTGCC CAGCTGATCT ACGACCTCAA GCAGGTCAAC CCGCAGGCGC TGGTGTCGGT AAAATTGGTG GCCGAGGCTG GCGTCGGTAC GATTGCCGCT GGTGTGGCCA AGGCTTATGC AGACCTGATC ACCATTTCCG GTTACGACGG TGGCACTGGT GCGTCGCCGC TGACCTCGAT CAAGTACGCT GGCGCCCCAT GGGAACTGGG CCTGGCTGAA ACCCACCAGA CCCTGCGCGG CAACGACCTG CGCGGCAAGG TACGGGTACA GACCGATGGT GGCCTGAAAA CTGGCCTGGA CGTGATCAAG GCAGCCATCC TCGGCGCCGA AAGCTTCGGC TTCGGCACCG CACCAATGAT CGCCCTGGGC TGCAAGTACC TGCGTATCTG CCACCTGAAC AACTGCGCCA CCGGCGTAGC CACCCAGAAC GACAAGCTGC GCAAGGACCA CTACATCGGC ACCGTCGACA TGGTGATCAA CTTCTTCACC TTCGTTGCCG AAGAAACCCG TGAGTGGCTG GCCAAGCTGG GCGTGCGCAG CCTCGGCGAA CTGATCGGCC GTACCGACCT GCTCGACGTA CTGCCAGGCG ACACCGAGCG CCAGCAGTAC CTGGACCTGT CGCCGCTGCT GGGCAGCTCG CATATTCCGG CAGACAAGCC GCAGTTCTGC GAAGTCGACA AGAACCCGCC GTTCGACAAG GGCGAGTTGG CCGAGAAAAT GGTGGAAATG GCCCTGCCAG CGATTCGCGA CCAGGCCGGT GGCGAGTTCG ACCTCGACAT CTGCAACTGC GACCGTTCCA TCGGTGCCCG TATCTCTGGC GAAATCGCCA AGCTGTACGG CAACCAGGGC ATGGCCGCCA ACCCGATCAC CTTCCGCTTC AAGGGTACTG CGGGCCAGAG CTTCGGCGTA TGGAACGCCG GCGGCCTGAA CCTGCACCTG CAAGGTGATG CCAACGACTA CGTCGGCAAG GGCATGACCG GTGGCAAGGT CACCATCGTG CCGCCAGCCG GCAGCCCGTT CGAAACCCAG CACAGCGCCA TCGTCGGCAA CACCTGCCTG TACGGTGCCA CTGGCGGCAA GCTGTTTGCC GCCGGTACCG CGGGCGAGCG CTTCGCTGTG CGTAACTCCG GCGCCCACGC TGTTGTCGAG GGCACTGGCG ATCACTGCTG TGAGTACATG ACCGGTGGCT TTGTCTGCGT CTTGGGCAAG ACCGGTTACA ACTTCGGTTC TGGCATGACT GGCGGCTTCG CCTACGTGCT CGACATGGAC AACACCTTCG TCGACAAACT CAACCATGAG CTGGTGGAAA TTCAGCGCAT CAGTGGTGAA GCGATGGAGG CTTACCGCAG CCACTTGGCG CGCGTCCTTG CCGAGTACGT GGAAGAGACC GGCAGCGAGT GGGGGCGTGA GCTCTCGGAG AACCTGGACG ACTACGTGCG GCGCTTCTGG CTGGTGAAGC CGAAGGCAGC CAACCTGAAG CAACTGCTGT CCAGCACCCG TGCCAACCCG CAGTAA
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Protein sequence | MKTGLYHPEE FKDNCGFGLI AHMTGEPSHH LLQTAMQALT CMTHRGGINA DGKTGDGCGL LMQKPDQFLR AVAQEHFAVE LPKQYAVGMV FFNQDPVKAE AARANMDREI LAAGLKLVGW RKVPIDTSVL GRLALERLPQ IEQVFIGGEG LSDQEFAIKL FSARRRSSVA NAHDSDHYIC SFSHKTIIYK GLMMPRDLAA FYPDLGDERL QTAICVFHQR FSTNTLPKWP LAQPFRFLAH NGEINTITGN RNWAMARRTK FANDQIPDLE ELGPLVNRVG SDSSSMDNML ELMVTGGIDL FRGVRMLVPP AWQNVETMDA DLRAFYEYNS MHMEPWDGPA GIVMTEGRHA VCLLDRNGLR PARWVTTTNG YITIASEIGV WGYQPEEVLA KGRVGPGQIL AVDTETGQIL DTDAIDNRLK SRHPYKRWLR QHATRIQATL TDDQGVASYD ADQLKQYMKM FQVTFEERDQ VLRPLGEQGQ EAVGSMGDDT PMAVLSQRVR SPYDFFRQQF AQVTNPPIDP LREAIVMSLE ICLGAERNIF QESPEHASRV ILSSPVISPA KWRSLMNLER EGFDRQLIDL NYEQGIGLEA AIRNIADQAE EAVRAGKTQL VLSDRYIAPG KLPVHASLAV GAVHHRLTEQ GLRCDSNILV ETATARDPHH FAVLLGFGAS AVYPYLAYEV LADLIRTGEV LGDLDEVFKY YRKGISKGLL KILSKMGIST IASYRGAQLF EAIGLAEEVV GLSFKGVSSR IKGARFVDLE SDQKLLAAEA WSARKPIQQG GLLKFVHGGE YHAYNPDVVN TLQAAVQQGD YAKFKEYTTL VDQRPVSMIR DLLKVKVADQ PLALEQIEPL EAILKRFDSA GISLGALSPE AHEALAEAMN RLGARSNSGE GGEDPSRYGT IKSSKIKQVA TGRFGVTPEY LVNAEVLQIK VAQGAKPGEG GQLPGGKVNG LIAKLRYAVP GVTLISPPPH HDIYSIEDLA QLIYDLKQVN PQALVSVKLV AEAGVGTIAA GVAKAYADLI TISGYDGGTG ASPLTSIKYA GAPWELGLAE THQTLRGNDL RGKVRVQTDG GLKTGLDVIK AAILGAESFG FGTAPMIALG CKYLRICHLN NCATGVATQN DKLRKDHYIG TVDMVINFFT FVAEETREWL AKLGVRSLGE LIGRTDLLDV LPGDTERQQY LDLSPLLGSS HIPADKPQFC EVDKNPPFDK GELAEKMVEM ALPAIRDQAG GEFDLDICNC DRSIGARISG EIAKLYGNQG MAANPITFRF KGTAGQSFGV WNAGGLNLHL QGDANDYVGK GMTGGKVTIV PPAGSPFETQ HSAIVGNTCL YGATGGKLFA AGTAGERFAV RNSGAHAVVE GTGDHCCEYM TGGFVCVLGK TGYNFGSGMT GGFAYVLDMD NTFVDKLNHE LVEIQRISGE AMEAYRSHLA RVLAEYVEET GSEWGRELSE NLDDYVRRFW LVKPKAANLK QLLSSTRANP Q
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