| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5122 |
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| Symbol | |
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| ID | 5872937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5729627 |
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| End bp | 5730871 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641550260 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001671342 |
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| Protein GI | 167036111 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAACTG CTGTAGCCCC CCTTCCTGCC GAGCCCGAAC CTGCCACCCT GAACGACATG
TGGATCGAAA AAGGCACCCC CGCCTTCATG AAGACCGTGC TGGCCCTGTT CAGCGGCGGC
TTCGCCACCT TCGCCCTGCT GTACTGCGTA CAGCCGATGA TGCCGCTGCT GTCCAAGGAA
TTTGCCATCA ACGCGGCGCA AAGCAGCTTG GTGCTGTCGG TGTCCACTGC CATGCTGGCG
TTCGGCCTGC TGATCACCGG CCCCATTTCT GACCGCATCG GGCGCAAGCC GGTGATGGTG
TTCGCCTTGG TCTGCGCCGC CCTGTCCACC CTGGCCAGCG CAGTGATGCC GAGCTGGGAG
CTGGTACTGG CCACCCGTGC GTTGGTCGGC CTGTCGTTGA GCGGCCTGGC TGCGGTGGCA
ATGACCTACC TGAGCGAAGA GATCCACCCG CAACACATTG GCCTGGCAAT GGGTCTGTAC
ATCGGCGGCA ACGCGATTGG CGGCATGAGT GGGCGGCTAA TCACTGGCGT CCTGATCGAC
TTCGTCAGCT GGCACACGGC GATGCTGACC ATCGGTGGCC TGGCCCTGGT AGCCGCACTG
GTGTTCTGGA AGGTACTGCC CGAATCGCGC AACTTCCGCC CGCAGATGAT GAGCCCGCGC
AGCCTTCTGG ATGGCTTTGT CATGCATTTC AAGGATGCCG GCCTGCCCTG GCTGTTCCTC
GAAGCCTTCC TGCTGATGGG TGCGTTCGTC ACCTTGTTCA ACTATATCGG CTACCGGCTG
CTGGCCGAGC CTTACCACAT GAACCAGGCG CTGGTGGGCT TGCTGTCGGT GGTTTATCTG
TCGGGCATCT ACAGCTCGGC GCAAGTCGGT GCCCTGGCTG ACAAGCTGGG CCGGCGCAAG
GTGTTCTGGG CCAGTATCGT GGTGATGGCC GGCGGCTTGC TGATGACCCT GGCCAGCCCG
CTGGCCATGG TGATCGTGGG TATGCTGGTG TTCACCTTCG GCTTCTTTGG CGCACACTCG
GTGGCCAGCA GCTGGATCGG ACGCAGAGCG CTGAAGGCCA AGGGACAGGC GTCGTCGCTG
TACCTGTTCA GCTACTACGC AGGGTCCAGC GTGGCCGGTA CGGCGGGCGG GGTGTTCTGG
CACCAGTGGG GCTGGAATGG CATTGGGCTG TTCATTGGCA GCTTGCTGGC GGTGGCGTTG
CTGGTGGCGT TGCACCTGAG CAAGTTACCC CCTAAATCGA GCTGA
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| Protein sequence | MKTAVAPLPA EPEPATLNDM WIEKGTPAFM KTVLALFSGG FATFALLYCV QPMMPLLSKE
FAINAAQSSL VLSVSTAMLA FGLLITGPIS DRIGRKPVMV FALVCAALST LASAVMPSWE
LVLATRALVG LSLSGLAAVA MTYLSEEIHP QHIGLAMGLY IGGNAIGGMS GRLITGVLID
FVSWHTAMLT IGGLALVAAL VFWKVLPESR NFRPQMMSPR SLLDGFVMHF KDAGLPWLFL
EAFLLMGAFV TLFNYIGYRL LAEPYHMNQA LVGLLSVVYL SGIYSSAQVG ALADKLGRRK
VFWASIVVMA GGLLMTLASP LAMVIVGMLV FTFGFFGAHS VASSWIGRRA LKAKGQASSL
YLFSYYAGSS VAGTAGGVFW HQWGWNGIGL FIGSLLAVAL LVALHLSKLP PKSS
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