| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5121 |
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| Symbol | |
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| ID | 5872936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5728619 |
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| End bp | 5729518 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641550259 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001671341 |
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| Protein GI | 167036110 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTGC GCCATCTGCG TTACTTCATC GCCGTGGCCG AAGAGCTGCA CTTTGGCCGC
GCCGCCCAGC AGCTGGGTAT TTCACAGCCA CCCTTGAGCC AGCAGATCCA GGCGCTGGAA
CAAGAGCTGG GGGCGCGTCT GTTCGACCGT ACCAATCGTC GGGTCGAGCT GAGCGAGGCG
GGGCGGCTGT TCCTTGAAGA GGCCAGGCAG GTGCTGGCGC AGGTAGAAAA GGCGGCAGAT
GTGGCCCGGC GTGCGCAACT GGGAGAGCTG GGCGAGATGA AAATAGGCTT CACCTCGTCG
GCTCCGTTCA CCTCGAAAAT TCCCAAGGCG ATCCATGCCT TCCGTCAGCG CTTCCCGTCG
GTGCACCTGA ACCTCAAGGA AATGAGCAGC CGTGATGTTG CCGAAGGGGT GTTCGATGAA
TCGATCGAAG TGGGGTTGAT GCGGCCGATG CCGCTACCGG AAGGGCTGGT GGCCACCGAG
TTGTTCCGCG AGCCGCTGGT GGCGGTGATC AATGCCTCGC ATCCGCTGGC CGAGGGCACT
GTGCAGGGTG TTTACATGGC GGCACTGGCC CATGAACCGT TCGTGTTCTT CCCGCGCAGT
TATGGCAGCG GCCTGCATGC GCAATTGCTG AGCCTGGCGC GACAGGCGGG CTTCAGCCCG
CACTTCGCAC AAGAGGCGGG GGAGGCGATG ACCATCATTG GCCTGGTGTC GGCGGGGTTG
GGCGTGTCGG TGTTGCCGGC GTCGTTCCAG CGCATGCGCA TTGAAGGCGT GGTGTACCGC
ACGCTGCTGG ATGAAGGGGC GATGTCGGCG GTGTGGCTGG TGCAACGCGA GCGCGGTAAT
TCGGTGATGG CCAAAGCGTT TGCCGAGCTG TTGACGGGGC AAGTGGTCGG CCAGGGCTGA
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| Protein sequence | MELRHLRYFI AVAEELHFGR AAQQLGISQP PLSQQIQALE QELGARLFDR TNRRVELSEA
GRLFLEEARQ VLAQVEKAAD VARRAQLGEL GEMKIGFTSS APFTSKIPKA IHAFRQRFPS
VHLNLKEMSS RDVAEGVFDE SIEVGLMRPM PLPEGLVATE LFREPLVAVI NASHPLAEGT
VQGVYMAALA HEPFVFFPRS YGSGLHAQLL SLARQAGFSP HFAQEAGEAM TIIGLVSAGL
GVSVLPASFQ RMRIEGVVYR TLLDEGAMSA VWLVQRERGN SVMAKAFAEL LTGQVVGQG
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