Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5118 |
Symbol | |
ID | 5872933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5725800 |
End bp | 5727260 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641550256 |
Product | hypothetical protein |
Protein accession | YP_001671338 |
Protein GI | 167036107 |
COG category | [S] Function unknown |
COG ID | [COG0397] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.380647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAGCCC TCGACCAACT CAGCTTCGAC AACCGCTTCG CCCGCCTGGG CGACGCGTTT TCCACCCAGG TGCTGCCTGA GCCCATCGCC GAGCCGCGGT TGGTCGTGGC AAGCGAATCG GCCATGGCGC TGCTCGACCT CGACCCCGCT CACGCCGAGC TTCCGGTGTT CGCCGAGTTG TTCAGCGGGC ACAAGCTGTG GGAAGAGGCC GACCCTCGGG CGATGGTCTA TTCCGGCCAC CAGTTCGGCT CGTACAACCC GCGCCTGGGC GACGGCCGTG GCCTGCTGCT GGCCGAAGTA CTGAACGATG CAGGTGAACA CTGGGACCTG CACCTCAAAG GCGCCGGCCA AACGCCGTAC TCGCGCATGG GTGACGGCCG TGCCGTGCTG CGCTCGTCGA TCCGCGAATT TCTCGCCTCC GAAGCCCTGC ACGCCCTCGG TATCCCCACC AGCCGGGCGC TGTGCGTGAT CGGCTCCAGC ACCCCGGTGT GGCGCGAAAC CCGCGAAAGC GCCGCCATGC TCACGCGCCT GGCACAGAGC CATGTGCGCT TCGGTCATTT CGAATACTTC TACTACACCA AGCAACCCGA GCAGCAGCGT GTGCTGATCG ACCATGTACT GGAGCAGCAC TACCCCGAAT GCCGTGATGC CGAGCAGCCC TACCTGGCCA TGTTCCGCAC CATTGTCGAG CGCAACGCCG AACTGATCGC CCGCTGGCAG GCCTACGGCT TTTGCCACGG GGTTATGAAC ACCGACAACA TGTCGATCCT GGGCATCACC TTCGACTTCG GCCCGTATGC CTTCCTCGAC GACTTCGATG CCAACTTCAT CTGCAACCAC TCCGACGACC GAGGCCGCTA CAGCTACGCC AACCAGGTGC CCATCGCCCA CTGGAACCTC AGCGCGCTGG CTCAGGCATT GACCACGGTG ATCGAGGTTG AGCCACTGAA GGAAACGTTG GGGCTGTTCC TGCCGCTGTA CCAGGCCCAT TACCTGGACC TGATGCGCCG ACGCTTGGGC CTGACCACTG CCGAAGAAGA CGACATGGCG CTGGTCGAGC GACTGCTGCA ATGCATGCAG CGTGGTGGCG TGGACTACAG CCTGTTCTTC CGCAAGCTGG GCGAACAGCC GGCGGCAGAC GCACTCAAGG TGGTGCGCGA CGACTTTATC GACCTGGCCG CTTTCGATGC CTGGGGCGCG GACTACCTGG CCCGTTGTGA TCGCGAACCC GGTAATGCCG AAGGCCGCCG CGAGCGGATG CATGCGGTGA ACCCGCTGTA CGTGTTGCGC AACTACCTGG CGCAGAAAGC CATCGAAGCG GCAGAAGCGG GTGATTACAG TGAAGTGCGT CGGCTGCATC AAGTGCTTAG CCACCCCTTC GAAGAACAAC CCGGTATGCA GGCCTACGCC GAACGGCCAC CAGAATGGGG CAAGCACCTG GAAATCAGCT GCTCCTCCTG A
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Protein sequence | MKALDQLSFD NRFARLGDAF STQVLPEPIA EPRLVVASES AMALLDLDPA HAELPVFAEL FSGHKLWEEA DPRAMVYSGH QFGSYNPRLG DGRGLLLAEV LNDAGEHWDL HLKGAGQTPY SRMGDGRAVL RSSIREFLAS EALHALGIPT SRALCVIGSS TPVWRETRES AAMLTRLAQS HVRFGHFEYF YYTKQPEQQR VLIDHVLEQH YPECRDAEQP YLAMFRTIVE RNAELIARWQ AYGFCHGVMN TDNMSILGIT FDFGPYAFLD DFDANFICNH SDDRGRYSYA NQVPIAHWNL SALAQALTTV IEVEPLKETL GLFLPLYQAH YLDLMRRRLG LTTAEEDDMA LVERLLQCMQ RGGVDYSLFF RKLGEQPAAD ALKVVRDDFI DLAAFDAWGA DYLARCDREP GNAEGRRERM HAVNPLYVLR NYLAQKAIEA AEAGDYSEVR RLHQVLSHPF EEQPGMQAYA ERPPEWGKHL EISCSS
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