Gene PputGB1_5118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5118 
Symbol 
ID5872933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5725800 
End bp5727260 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content63% 
IMG OID641550256 
Producthypothetical protein 
Protein accessionYP_001671338 
Protein GI167036107 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.380647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGCCC TCGACCAACT CAGCTTCGAC AACCGCTTCG CCCGCCTGGG CGACGCGTTT 
TCCACCCAGG TGCTGCCTGA GCCCATCGCC GAGCCGCGGT TGGTCGTGGC AAGCGAATCG
GCCATGGCGC TGCTCGACCT CGACCCCGCT CACGCCGAGC TTCCGGTGTT CGCCGAGTTG
TTCAGCGGGC ACAAGCTGTG GGAAGAGGCC GACCCTCGGG CGATGGTCTA TTCCGGCCAC
CAGTTCGGCT CGTACAACCC GCGCCTGGGC GACGGCCGTG GCCTGCTGCT GGCCGAAGTA
CTGAACGATG CAGGTGAACA CTGGGACCTG CACCTCAAAG GCGCCGGCCA AACGCCGTAC
TCGCGCATGG GTGACGGCCG TGCCGTGCTG CGCTCGTCGA TCCGCGAATT TCTCGCCTCC
GAAGCCCTGC ACGCCCTCGG TATCCCCACC AGCCGGGCGC TGTGCGTGAT CGGCTCCAGC
ACCCCGGTGT GGCGCGAAAC CCGCGAAAGC GCCGCCATGC TCACGCGCCT GGCACAGAGC
CATGTGCGCT TCGGTCATTT CGAATACTTC TACTACACCA AGCAACCCGA GCAGCAGCGT
GTGCTGATCG ACCATGTACT GGAGCAGCAC TACCCCGAAT GCCGTGATGC CGAGCAGCCC
TACCTGGCCA TGTTCCGCAC CATTGTCGAG CGCAACGCCG AACTGATCGC CCGCTGGCAG
GCCTACGGCT TTTGCCACGG GGTTATGAAC ACCGACAACA TGTCGATCCT GGGCATCACC
TTCGACTTCG GCCCGTATGC CTTCCTCGAC GACTTCGATG CCAACTTCAT CTGCAACCAC
TCCGACGACC GAGGCCGCTA CAGCTACGCC AACCAGGTGC CCATCGCCCA CTGGAACCTC
AGCGCGCTGG CTCAGGCATT GACCACGGTG ATCGAGGTTG AGCCACTGAA GGAAACGTTG
GGGCTGTTCC TGCCGCTGTA CCAGGCCCAT TACCTGGACC TGATGCGCCG ACGCTTGGGC
CTGACCACTG CCGAAGAAGA CGACATGGCG CTGGTCGAGC GACTGCTGCA ATGCATGCAG
CGTGGTGGCG TGGACTACAG CCTGTTCTTC CGCAAGCTGG GCGAACAGCC GGCGGCAGAC
GCACTCAAGG TGGTGCGCGA CGACTTTATC GACCTGGCCG CTTTCGATGC CTGGGGCGCG
GACTACCTGG CCCGTTGTGA TCGCGAACCC GGTAATGCCG AAGGCCGCCG CGAGCGGATG
CATGCGGTGA ACCCGCTGTA CGTGTTGCGC AACTACCTGG CGCAGAAAGC CATCGAAGCG
GCAGAAGCGG GTGATTACAG TGAAGTGCGT CGGCTGCATC AAGTGCTTAG CCACCCCTTC
GAAGAACAAC CCGGTATGCA GGCCTACGCC GAACGGCCAC CAGAATGGGG CAAGCACCTG
GAAATCAGCT GCTCCTCCTG A
 
Protein sequence
MKALDQLSFD NRFARLGDAF STQVLPEPIA EPRLVVASES AMALLDLDPA HAELPVFAEL 
FSGHKLWEEA DPRAMVYSGH QFGSYNPRLG DGRGLLLAEV LNDAGEHWDL HLKGAGQTPY
SRMGDGRAVL RSSIREFLAS EALHALGIPT SRALCVIGSS TPVWRETRES AAMLTRLAQS
HVRFGHFEYF YYTKQPEQQR VLIDHVLEQH YPECRDAEQP YLAMFRTIVE RNAELIARWQ
AYGFCHGVMN TDNMSILGIT FDFGPYAFLD DFDANFICNH SDDRGRYSYA NQVPIAHWNL
SALAQALTTV IEVEPLKETL GLFLPLYQAH YLDLMRRRLG LTTAEEDDMA LVERLLQCMQ
RGGVDYSLFF RKLGEQPAAD ALKVVRDDFI DLAAFDAWGA DYLARCDREP GNAEGRRERM
HAVNPLYVLR NYLAQKAIEA AEAGDYSEVR RLHQVLSHPF EEQPGMQAYA ERPPEWGKHL
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