Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5109 |
Symbol | |
ID | 5872924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5706990 |
End bp | 5708306 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641550247 |
Product | carboxyl-terminal protease |
Protein accession | YP_001671329 |
Protein GI | 167036098 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCACT CGCCTCGTCT CACCCAGCTG GCCCTGTCCA TCGCCCTGGC GGTCGGCGCG CCCCTGGCCA CTGCCGCCGA GCCGGCCAAG GCTGCCGCAG TGCCCGCCAC CGAGGTGACC GCCAAGGCAC CACTGCCGTT GGAAGAACTG CGCACCTTCG CCGAGGTCAT GGACCGTATC AAGGCCGCCT ACGTCGAACC GGTAGACGAC AAGACCCTGC TGGAAAACGC CATCAAGGGC ATGCTCAGCA ACCTGGACCC GCACTCGGCC TACCTTGGCC CCGAGGACTT CCAGGAGCTG CAGGAGAGCA CCAGCGGCGA ATTCGGCGGG CTGGGCATCG AAGTGGGCCA GGAAGATGGC TTCATCAAGG TGGTGTCGCC GATCGACGAC ACCCCGGCCT CACGTGCCGG CGTGCAGGCG GGTGACCTGA TCGTCAAGAT CAACGGTGCC CCGACACGCG GCCAGACCAT GACCGAAGCG GTCGACAAGA TGCGCGGCAA GGTCGGCGAA AAAATCACCC TGACCCTGGT GCGCGATGGC GGCAACCCGT TTGATGTGAC CCTGGCCCGC GCGGTCATCC AGGTCAAGAG CGTGAAGAGC CAACTGCTGG AGAACGACTA CGGTTACATC CGTATCACCC AGTTCCAGGT CAAGACCGGC GACGAAGTGG GCAAAGCCCT GGCCAAGCTG CGCAAGGACA ACGGCAAGAA GCTGCGCGGG GTAGTGCTGG ACCTGCGTAA CAACCCAGGT GGCGTGCTGC AGTCGGCCGT GGAAGTGGCC GACCACTTCC TGACCAAGGG CCTGATCGTC TACACCAAGG GCCGTATCGC CAACTCCGAG CTGCGCTTCT CGGCCGACCC GGCCGACGCC AGTGAAGGCG TACCCCTGGT GGTGCTGATC AACGGTGGCA GTGCCTCGGC GTCGGAAATT GTCGCCGGCG CACTGCAGGA CCAGAAGCGC GCCGTGCTGA TGGGGACCGA CAGCTTCGGC AAAGGCTCGG TGCAGACTGT GCTGCCGCTG GCCAACGACC GTGCCCTGAA ACTCACCACC GCCTTGTACT ACACCCCCAA CGGCCGCTCG ATCCAGGCCC AGGGCATCGT ACCGGACATC GAGGTGCGCC CGGCCAAGCT CACCGCCGAA GTCGACACCG AAAACTTCAA GGAAGCCGAC CTGCAGGGCC ACTTGGGCAA CGGCAACGGC GGCGCCGACC GCCCGACGGG CAGCAGCAAA CGCAAGGAAC GTCCGCAGGA CGATGACTTC CAACTGAGCC AGGCGCTGAG CCTGCTCAAA GGGCTGAACA TCACCTCGGG CAAATGA
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Protein sequence | MLHSPRLTQL ALSIALAVGA PLATAAEPAK AAAVPATEVT AKAPLPLEEL RTFAEVMDRI KAAYVEPVDD KTLLENAIKG MLSNLDPHSA YLGPEDFQEL QESTSGEFGG LGIEVGQEDG FIKVVSPIDD TPASRAGVQA GDLIVKINGA PTRGQTMTEA VDKMRGKVGE KITLTLVRDG GNPFDVTLAR AVIQVKSVKS QLLENDYGYI RITQFQVKTG DEVGKALAKL RKDNGKKLRG VVLDLRNNPG GVLQSAVEVA DHFLTKGLIV YTKGRIANSE LRFSADPADA SEGVPLVVLI NGGSASASEI VAGALQDQKR AVLMGTDSFG KGSVQTVLPL ANDRALKLTT ALYYTPNGRS IQAQGIVPDI EVRPAKLTAE VDTENFKEAD LQGHLGNGNG GADRPTGSSK RKERPQDDDF QLSQALSLLK GLNITSGK
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