Gene PputGB1_5098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5098 
Symbol 
ID5872913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5696221 
End bp5697627 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content59% 
IMG OID641550236 
Productglutamine synthetase, type I 
Protein accessionYP_001671318 
Protein GI167036087 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAGT CGGTTCAACT CATCAAAGAT CATGACGTCA AGTGGATTGA TCTGCGTTTC 
ACGGACACCA AAGGCATTCA GCACCACGTG ACCATGCCGT CGCGTGATGC GCTGGACGAA
GACTTCTTCG AAGTCGGCAA GATGTTCGAC GGTTCCTCCA TCGCTGGCTG GAAAGGCATC
GAAGCCTCCG ACATGATCCT GATGCCGGTC GACGACACTG CCGTCCTGGA CCCGTTCACC
GAAGAGCCAA CCCTGATCAT CACCTGCGAC ATCGTCGACC CGTCGAGCAT GCAGGGCTAC
GATCGCGACC CACGCGCCAT CGCCAAGCGT GCCGAAGAGT ACCTGAAGAG CACCGGCATC
GGTGACACCG TCTTCGCCGG CCCAGAGCCT GAGTTCTTCA TCTTCGACGA AGTGAAGTTC
AAGTCGGACA TTTCCGGCTC GATGTTCAAG ATCTTCTCCG AGCAAGGCTC GTGGATGACC
GACGCTGACG TGGAAGGCGG CAACAAAGGC CACCGTCCAG GCGTGAAGGG CGGCTACTTC
CCGGTTCCGC CGTTCGACCA CGACCACGAA ATCCGTACTG CCATGTGCAA CGCACTGGAA
GAAATGGGCC AGACCGTTGA AGTTCACCAC CACGAAGTGG CGACTGCCGG CCAGAACGAA
ATCGGCGTCA AGTTCAACAC CCTGGTGAAA AAGGCTGACG AAGTACAGGC GCTGAAATAC
GTCGTGCACA ACGTTGCCGA CGCCTACGGC CGTACCGCCA CCTTCATGCC TAAGCCTCTG
TACGGCGACA ACGGCTCGGG CATGCACGTA CACATGTCGA TCTGGAAAGA CGGCAAGAAC
ACCTTCTCGG GTGAAGGCTA TGCCGGCCTG TCCGACACCG CCCTGTACTT CATCGGCGGT
ATCATCAAGC ACGGTAAGGC CCTGAACGGC TTCACCAACC CGTCGACCAA CTCCTACAAG
CGTCTGGTCC CAGGCTTCGA AGCCCCGGTA ATGCTGGCCT ACTCGGCTCG CAACCGTTCC
GCCTCGATCC GTATTCCTTA CGTCGGCAGC CCGAAAGCCC GCCGTATCGA AGCCCGCTTC
CCGGACCCAT CGGCCAACCC GTACCTGGCC TTCGCGGCCC TGCTGATGGC TGGCCTGGAT
GGCATCCAGA ACAAGATCCA CCCAGGCGAC GCGGCCGACA AGAACCTGTA CGACCTGCCA
CCAGAAGAAG CCAAGAACAT CCCGCAAGTG TGCGGCAGCC TGAAAGAGGC TCTGGAAGAG
CTGGACAAAG GCCGCGCGTT CCTGACCAAG GGCGGCGTGT TCTCCGACGA CTTCATCGAT
GCCTTCATCG AGCTGAAGAG CGAAGAAGAA ATCAAGGTCC GCACCTTCGT ACACCCGCTG
GAATACGAGC TGTACTACAG CTGCTGA
 
Protein sequence
MSKSVQLIKD HDVKWIDLRF TDTKGIQHHV TMPSRDALDE DFFEVGKMFD GSSIAGWKGI 
EASDMILMPV DDTAVLDPFT EEPTLIITCD IVDPSSMQGY DRDPRAIAKR AEEYLKSTGI
GDTVFAGPEP EFFIFDEVKF KSDISGSMFK IFSEQGSWMT DADVEGGNKG HRPGVKGGYF
PVPPFDHDHE IRTAMCNALE EMGQTVEVHH HEVATAGQNE IGVKFNTLVK KADEVQALKY
VVHNVADAYG RTATFMPKPL YGDNGSGMHV HMSIWKDGKN TFSGEGYAGL SDTALYFIGG
IIKHGKALNG FTNPSTNSYK RLVPGFEAPV MLAYSARNRS ASIRIPYVGS PKARRIEARF
PDPSANPYLA FAALLMAGLD GIQNKIHPGD AADKNLYDLP PEEAKNIPQV CGSLKEALEE
LDKGRAFLTK GGVFSDDFID AFIELKSEEE IKVRTFVHPL EYELYYSC