| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5091 |
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| Symbol | |
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| ID | 5872906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5686944 |
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| End bp | 5689394 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641550229 |
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| Product | glycogen/starch/alpha-glucan phosphorylase |
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| Protein accession | YP_001671311 |
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| Protein GI | 167036080 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAGG AACCTAAAGC TCGTGACGCC GAAGTCGCGG ATTTTCGCGC TGCTGTACTG
AACAAGCTGA CCTACGCGGT CGGCAAGGAC CCGGAGCACG CCTTCGACCA TGACTGGTTC
GAAGCCATTG CCCTGGCTGC GCGCGATCAC ATGGTCGATC ACTGGATGGA TCACACGCGT
CAGGCCTATC GGCGCAGCCA GAAACGGGTC TACTACCTTT CCCTGGAATT CCTCATCGGC
CGCCTGCTGT ACGACAGCCT GAGCAACTTG GGCTTGTTGG ACATTGCGCG CGATGCGCTG
GAAGGGCTGG ATGTGGACCT TGAACGTATT CGTCTGCTTG AGCCGGATGC TGCGTTGGGC
AATGGTGGCT TGGGCCGATT GGCTGCATGC TTCATGGAGA GCATGTCTAC CTTGGGTATC
GCTGCCCATG GCTACGGCAT CCGCTACGAG CACGGGCTGT TCCGGCAGGC GGTGGTCGAT
GGCTGGCAGC AGGAGCAGAC TGAAAACTGG CTGGATTTCG GCAACCCCTG GGAGTTCGAA
CGCGCCGAGG TGATCTACCC GATCAGCTTC GGCGGCAGTG TCGAAACCGT GCACGATGCC
AGCGGTACCC CGCGCCAGGT ATGGTCGCCC GGTGAAACGG TGCGGGCGGT GGCTTACGAT
ACGCCGGTGG TCGGCTGGCG CGGAGCCAGC GTCAATACCC TGCGCTTGTG GCGTGCACGG
GCGTTGGAAG AGCTGCACTT GGAGCGTTTC AACGCCGGTG ACCATCTGGG GGCGGTGGCC
GAAGTGGCGC GTGCCGAGAG CATCTCGCGT GTGCTGTACC CGGCTGACAG TACCGAGGCC
GGTCAGGAGT TGCGCCTGCG CCAGGAGTAT TTCTTTGTGT CGGCTTCGCT GCAGGACTTG
CTGCGCCGTC ACCTGAACAT GCACAAGGAC CTGCTCAACC TGCCCGATGC GGCGGCCATC
CAGCTCAACG ACACCCACCC CTCGATTGCC GTGGCGGAGT TGATGCGGTT ACTGGTGGAT
CAGCACGAAG TGCCTTGGGA AAAGGCCTGG GAGCTGACCG TCGGTACGCT CGCCTACACC
AACCACACCC TGTTGCCCGA AGCCCTGGAA ACCTGGCCGG TAGCGTTGAT GGAGCGCATG
CTGCCGCGGC ACATGCAGAT CATCTACCTG ATCAATGCCT TCCATATCGA TGCCTTACGG
GCCAAAGGCC TGCACGATTT CGACGTGCTG CGCGCGGTGT CGTTGATCGA AGAAGACAAC
GGCCGTCGGG TGCGCATGGG TAACCTGGCG TTTCTTGGCT CGCACAGCGT CAACGGCGTG
TCGGCGCTGC ACAGCAAGCT GATGAAGAGC ACGGTGTTTT CCGAACTGCA CAAGCTCTAC
CCGCAACGGA TCAACAACAA GACCAATGGC ATTACCTTCC GCCGCTGGTT GTACCAGTCC
AACCCTCAGC TGACCGAGAT GCTGGTCGAG GCGCTTGGCC CGGAACTCAA GGACGACCCG
GAGGCGCTTC TGGCCGGCCT GGTGCCGTTC GCCGACAAAG CCGGTTTCCG CAAGCAGTTC
GCGGCCCAGC GCCTGCACAG CAAACGCGCC CTGGCCAGCA TCATCCAGGA CCGCATTGGC
GTTACGGTCA ACCCCGAGGC GCTGTTTGAC GTGCAGGTCA AACGCATTCA CGAGTACAAG
CGCCAGCTGC TGAACCTCCT GCACACCGTT GCGCTGTACC AGGCCATGCG CAATGACCCA
GGCACCAATT GGGTGCCGCG GGTGAAGATC TTCGCTGGCA AGGCTGCGGC CAGTTACCAT
CAGGCCAAGC TGATCATAAA GCTGGCCAAC GACATCGCCC GGGTGGTGAA CAACGACCCG
ACCGTGCGCG GCTTGCTGAA GGTGGTATTC CTGCCTAACT ACAACGTCAG CCTGGCCGAA
AGCATCATTC CGGCGGCGGA CCTTTCCGAA CAGATTTCCA CCGCCGGTTA CGAGGCCTCT
GGCACCAGCA ACATGAAGTT CGGCCTCAAT GGCGCGCTGA CCATCGGCAC CTTGGATGGC
GCCAACGTAG AGATGTGCGA GCAGGTAGGG GCCGACAATA TGTTCATCTT CGGCCTGACC
GCGCAGCAGG TCGAGGCACG CAAGCGGGCC GGTGATTTTG GTGCCAATGC CGCCATAGCC
GCCTCCAGCC GCTTGAGCGA TGTGTTGCAG GCCATTCGCA GCGGCGTGTT CTCGTCAGAC
GACCCGTCAC GCTACACCGG GTTGATCGAT GGCCTGGTGG CCTACGATCG TTTCCTCGTA
TGCGCCGATT TCGATGCCTA CTGGGATGCC CAGCGACGGG TCGAAGACCT GTGGCACACG
CCGCAGGAAT GGTGGCGCAT GGCGGTGCTG AACACCGCGC GGATGGGTTG GTTCTCGTCG
GACCGGACCA TTCGCGAATA TGCCAACGAG ATCTGGAAGG CTCTGGATTG A
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| Protein sequence | MSQEPKARDA EVADFRAAVL NKLTYAVGKD PEHAFDHDWF EAIALAARDH MVDHWMDHTR
QAYRRSQKRV YYLSLEFLIG RLLYDSLSNL GLLDIARDAL EGLDVDLERI RLLEPDAALG
NGGLGRLAAC FMESMSTLGI AAHGYGIRYE HGLFRQAVVD GWQQEQTENW LDFGNPWEFE
RAEVIYPISF GGSVETVHDA SGTPRQVWSP GETVRAVAYD TPVVGWRGAS VNTLRLWRAR
ALEELHLERF NAGDHLGAVA EVARAESISR VLYPADSTEA GQELRLRQEY FFVSASLQDL
LRRHLNMHKD LLNLPDAAAI QLNDTHPSIA VAELMRLLVD QHEVPWEKAW ELTVGTLAYT
NHTLLPEALE TWPVALMERM LPRHMQIIYL INAFHIDALR AKGLHDFDVL RAVSLIEEDN
GRRVRMGNLA FLGSHSVNGV SALHSKLMKS TVFSELHKLY PQRINNKTNG ITFRRWLYQS
NPQLTEMLVE ALGPELKDDP EALLAGLVPF ADKAGFRKQF AAQRLHSKRA LASIIQDRIG
VTVNPEALFD VQVKRIHEYK RQLLNLLHTV ALYQAMRNDP GTNWVPRVKI FAGKAAASYH
QAKLIIKLAN DIARVVNNDP TVRGLLKVVF LPNYNVSLAE SIIPAADLSE QISTAGYEAS
GTSNMKFGLN GALTIGTLDG ANVEMCEQVG ADNMFIFGLT AQQVEARKRA GDFGANAAIA
ASSRLSDVLQ AIRSGVFSSD DPSRYTGLID GLVAYDRFLV CADFDAYWDA QRRVEDLWHT
PQEWWRMAVL NTARMGWFSS DRTIREYANE IWKALD
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