Gene PputGB1_5084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5084 
Symbol 
ID5872899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5681210 
End bp5681782 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content62% 
IMG OID641550222 
Producthypothetical protein 
Protein accessionYP_001671304 
Protein GI167036073 
COG category[S] Function unknown 
COG ID[COG3758] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.932324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGC TGCAGTTGTT GCGTGCGCAG GATTACCCGC GCATGCCGTG GAAGAACGGT 
GGCGGTTTCA CCGAAGAAAT TACCCGCGAC AGTGGCGAGG GCCTGGATGG CTTTGGCTGG
CGCCTGTCGA TTGCCGATAT CGAAGAGTCG GGTGGTTTTT CCACCTTCGC CGGTTATCAG
CGAATCATCA CCGTGCTGCA GGGCGACGGC ATGCGCTTGA TGGTCGACGG CCAGGCCAGC
CGGCCGTTGC TGCCGTTCGA TGCCTTTGCC TTCAGCGGTG AAAGCCAGGT CAGTTGCAAG
CTGCTGGGGG GGGCGATCCG CGATTTCAAC CTGATCTATG CGCCGCAGCG GTATCGGGCG
CGGTTGCAGT GGTTCGATGG CACCAGCCGG TTGTACAGCT CGGCGTCGAC GGTGCTGTTG
TTTGCGGCCG GTAGCCAGGT CGAGGTTGGC GTTGCCGGGC GTGAGACGCA GCGGTTGGGG
TTGTATGACT GCCTGCGGCT GGAGGGCAAC GACGAGTTGC TTGGGCTGGA GGTTCAGGGG
CGGTTTTGCT TGATCGAGCT CATTTTGCGC TGA
 
Protein sequence
MSQLQLLRAQ DYPRMPWKNG GGFTEEITRD SGEGLDGFGW RLSIADIEES GGFSTFAGYQ 
RIITVLQGDG MRLMVDGQAS RPLLPFDAFA FSGESQVSCK LLGGAIRDFN LIYAPQRYRA
RLQWFDGTSR LYSSASTVLL FAAGSQVEVG VAGRETQRLG LYDCLRLEGN DELLGLEVQG
RFCLIELILR