Gene PputGB1_5080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5080 
Symbol 
ID5872895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5674718 
End bp5675923 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content67% 
IMG OID641550218 
Productimidazolonepropionase 
Protein accessionYP_001671300 
Protein GI167036069 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID[TIGR01224] imidazolonepropionase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.359513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACCC TCTGGCAGCA TTGCCATGTG GCAACCATGG CCGAAGGCCG ATACTCGGCC 
ATCGAAGACG CGGCCATCGT CACCAGCGCC GGGCTGATCG AATGGATCGG CCCACGCGCC
GAGCTGGCAC CGGTCGAGGC TGACCGCACG GTGGACCTGG GCGGCGCATG GGTCACCCCG
GGGCTGATCG ACTGCCACAC CCACGCGGTG TTCGGTGGCA ACCGCAGCGG TGAGTTCGAG
CAGCGCCTGC AAGGCGTGAG CTATGCCGAA ATCGCAGCGC AAGGCGGTGG TATCGCCAGC
ACCGTGCGGG CCACCCGCGC GGCCAGCGAA GACGAGCTGT TCGCCAGTGC TCGCCAGCGG
GTCCAGGCGC TGATGCGCGA TGGCGTGACC ACGATCGAGA TCAAGTCCGG CTACGGCCTG
GACCTGGCCA ACGAGCGCAA GATGCTGCGT GTGGCCCGGC GCTTGGCCGA CGAGCTGCCG
TTGGCGGTGC GTGCCACCTG CCTGGCGGCG CATGCCTTGC CGCCGGAGTA CGCGGGCCGG
GCCGACGATT ACATCGCGCA CATCTGTGAC GAGATGCTGC CAGCCCTGGC CGCCGAAGGC
CTGGTGGATG CGGTGGATGC CTTCTGCGAA CACCTGGCGT TCTCCCCAGC CCAGGTCGAG
CGGTTGTTCA TCAAGGCGCG CGCGCTGGGC CTGCCGGTCA AACTGCACGC CGAACAGCTG
TCGTCGTTGC ATGGCTCCAG CCTGGCAGCA CGCTACCAGG CACTGTCGGC CGACCACCTG
GAGTTCATGA CCGAGGAAGA CGCCATTGCC ATGGCAAAAG CCGGCACGGT CGCCGTGCTG
CTGCCGGGCG CCTTCTACTT CCTGCGCGAA ACCCAGTTGC CGCCCATGGA CGCCTTGCGC
CGCCACGGAG TGAAGATTGC CCTGGCCAGC GACCTCAACC CCGGCACTTC GCCAGGGCTG
TCACTGCGCT TGATGCTGAA CATGGGCTGT ACCTGTTTCC GCATGACCCC GGAAGAAGCC
TTGGCCGGCG TCACCGTGCA TGCCGCCACT GCTTTGGGCC TGGGCGACAG CCACGGCTCG
CTGGAGGTGG GCAAGGTGGC CGACTTCGTC GCCTGGCAAA TCGAACGTCC CGCCGACCTG
GCCTACTGGC TGGGTGGCGA CCTGCCCAAG CGCGTGGTGC GCAAGGGCCA CGAAATCTCC
AACTGA
 
Protein sequence
MRTLWQHCHV ATMAEGRYSA IEDAAIVTSA GLIEWIGPRA ELAPVEADRT VDLGGAWVTP 
GLIDCHTHAV FGGNRSGEFE QRLQGVSYAE IAAQGGGIAS TVRATRAASE DELFASARQR
VQALMRDGVT TIEIKSGYGL DLANERKMLR VARRLADELP LAVRATCLAA HALPPEYAGR
ADDYIAHICD EMLPALAAEG LVDAVDAFCE HLAFSPAQVE RLFIKARALG LPVKLHAEQL
SSLHGSSLAA RYQALSADHL EFMTEEDAIA MAKAGTVAVL LPGAFYFLRE TQLPPMDALR
RHGVKIALAS DLNPGTSPGL SLRLMLNMGC TCFRMTPEEA LAGVTVHAAT ALGLGDSHGS
LEVGKVADFV AWQIERPADL AYWLGGDLPK RVVRKGHEIS N