Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5080 |
Symbol | |
ID | 5872895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5674718 |
End bp | 5675923 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641550218 |
Product | imidazolonepropionase |
Protein accession | YP_001671300 |
Protein GI | 167036069 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
TIGRFAM ID | [TIGR01224] imidazolonepropionase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.359513 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACCC TCTGGCAGCA TTGCCATGTG GCAACCATGG CCGAAGGCCG ATACTCGGCC ATCGAAGACG CGGCCATCGT CACCAGCGCC GGGCTGATCG AATGGATCGG CCCACGCGCC GAGCTGGCAC CGGTCGAGGC TGACCGCACG GTGGACCTGG GCGGCGCATG GGTCACCCCG GGGCTGATCG ACTGCCACAC CCACGCGGTG TTCGGTGGCA ACCGCAGCGG TGAGTTCGAG CAGCGCCTGC AAGGCGTGAG CTATGCCGAA ATCGCAGCGC AAGGCGGTGG TATCGCCAGC ACCGTGCGGG CCACCCGCGC GGCCAGCGAA GACGAGCTGT TCGCCAGTGC TCGCCAGCGG GTCCAGGCGC TGATGCGCGA TGGCGTGACC ACGATCGAGA TCAAGTCCGG CTACGGCCTG GACCTGGCCA ACGAGCGCAA GATGCTGCGT GTGGCCCGGC GCTTGGCCGA CGAGCTGCCG TTGGCGGTGC GTGCCACCTG CCTGGCGGCG CATGCCTTGC CGCCGGAGTA CGCGGGCCGG GCCGACGATT ACATCGCGCA CATCTGTGAC GAGATGCTGC CAGCCCTGGC CGCCGAAGGC CTGGTGGATG CGGTGGATGC CTTCTGCGAA CACCTGGCGT TCTCCCCAGC CCAGGTCGAG CGGTTGTTCA TCAAGGCGCG CGCGCTGGGC CTGCCGGTCA AACTGCACGC CGAACAGCTG TCGTCGTTGC ATGGCTCCAG CCTGGCAGCA CGCTACCAGG CACTGTCGGC CGACCACCTG GAGTTCATGA CCGAGGAAGA CGCCATTGCC ATGGCAAAAG CCGGCACGGT CGCCGTGCTG CTGCCGGGCG CCTTCTACTT CCTGCGCGAA ACCCAGTTGC CGCCCATGGA CGCCTTGCGC CGCCACGGAG TGAAGATTGC CCTGGCCAGC GACCTCAACC CCGGCACTTC GCCAGGGCTG TCACTGCGCT TGATGCTGAA CATGGGCTGT ACCTGTTTCC GCATGACCCC GGAAGAAGCC TTGGCCGGCG TCACCGTGCA TGCCGCCACT GCTTTGGGCC TGGGCGACAG CCACGGCTCG CTGGAGGTGG GCAAGGTGGC CGACTTCGTC GCCTGGCAAA TCGAACGTCC CGCCGACCTG GCCTACTGGC TGGGTGGCGA CCTGCCCAAG CGCGTGGTGC GCAAGGGCCA CGAAATCTCC AACTGA
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Protein sequence | MRTLWQHCHV ATMAEGRYSA IEDAAIVTSA GLIEWIGPRA ELAPVEADRT VDLGGAWVTP GLIDCHTHAV FGGNRSGEFE QRLQGVSYAE IAAQGGGIAS TVRATRAASE DELFASARQR VQALMRDGVT TIEIKSGYGL DLANERKMLR VARRLADELP LAVRATCLAA HALPPEYAGR ADDYIAHICD EMLPALAAEG LVDAVDAFCE HLAFSPAQVE RLFIKARALG LPVKLHAEQL SSLHGSSLAA RYQALSADHL EFMTEEDAIA MAKAGTVAVL LPGAFYFLRE TQLPPMDALR RHGVKIALAS DLNPGTSPGL SLRLMLNMGC TCFRMTPEEA LAGVTVHAAT ALGLGDSHGS LEVGKVADFV AWQIERPADL AYWLGGDLPK RVVRKGHEIS N
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