Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5077 |
Symbol | |
ID | 5872892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5672421 |
End bp | 5672858 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641550215 |
Product | D-tyrosyl-tRNA(Tyr) deacylase |
Protein accession | YP_001671297 |
Protein GI | 167036066 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1490] D-Tyr-tRNAtyr deacylase |
TIGRFAM ID | [TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGGGCC TGCTGCAGCG CGTGCGCGGT GCACGCGTCG AAGTAGCGGG GGAGGTGGTC GGCGCCATCG ACCAGGGTCT GCTGGTACTG GTGGCGGTCG AGCCTGAAGA TTCCCGTGAA CAGGCCGATA AGCTGTTGCA CAAGCTGCTG AACTACCGTG TGTTCAGCGA CGAGCAAGGC AAGATGAACC TGTCGCTCAA GGATGTCGGG GGTGGCTTGT TGCTGGTGTC GCAGTTCACC TTGGCGGCCG ACACCCGCAA TGGCATGCGC CCAAGCTTCT CGACGGCAGC GCCACCGGCC CTCGGCGCCG AATTGTTCGA CTATCTTTTG CAGCAGGCAA ACGCTCAGCA CGCCGACGTG GCCAGCGGCC GCTTCGGTGC GGATATGCAG GTGCACCTGG TCAATGATGG CCCCGTAACA TTTATGTTAC AAATGTGA
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Protein sequence | MRGLLQRVRG ARVEVAGEVV GAIDQGLLVL VAVEPEDSRE QADKLLHKLL NYRVFSDEQG KMNLSLKDVG GGLLLVSQFT LAADTRNGMR PSFSTAAPPA LGAELFDYLL QQANAQHADV ASGRFGADMQ VHLVNDGPVT FMLQM
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