Gene PputGB1_5077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5077 
Symbol 
ID5872892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5672421 
End bp5672858 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content61% 
IMG OID641550215 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_001671297 
Protein GI167036066 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGGCC TGCTGCAGCG CGTGCGCGGT GCACGCGTCG AAGTAGCGGG GGAGGTGGTC 
GGCGCCATCG ACCAGGGTCT GCTGGTACTG GTGGCGGTCG AGCCTGAAGA TTCCCGTGAA
CAGGCCGATA AGCTGTTGCA CAAGCTGCTG AACTACCGTG TGTTCAGCGA CGAGCAAGGC
AAGATGAACC TGTCGCTCAA GGATGTCGGG GGTGGCTTGT TGCTGGTGTC GCAGTTCACC
TTGGCGGCCG ACACCCGCAA TGGCATGCGC CCAAGCTTCT CGACGGCAGC GCCACCGGCC
CTCGGCGCCG AATTGTTCGA CTATCTTTTG CAGCAGGCAA ACGCTCAGCA CGCCGACGTG
GCCAGCGGCC GCTTCGGTGC GGATATGCAG GTGCACCTGG TCAATGATGG CCCCGTAACA
TTTATGTTAC AAATGTGA
 
Protein sequence
MRGLLQRVRG ARVEVAGEVV GAIDQGLLVL VAVEPEDSRE QADKLLHKLL NYRVFSDEQG 
KMNLSLKDVG GGLLLVSQFT LAADTRNGMR PSFSTAAPPA LGAELFDYLL QQANAQHADV
ASGRFGADMQ VHLVNDGPVT FMLQM