| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5074 |
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| Symbol | |
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| ID | 5872889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5666802 |
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| End bp | 5667602 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641550212 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001671294 |
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| Protein GI | 167036063 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.599311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAGA AATACCTTTC GCGACTGTTG GTCGGTGTTA CCGCCCTGGT CGCCGTGACA
GCGGCCCAGG CGGGCGCCAT CGATGACGCG GTCAAGCGCG GCACCTTGCG GGTGGGCATG
GACCCGACCT ACATGCCGTT CCAGATGACC AACAAGCGTG GCGAGATCAT CGGCTTCGAA
GTCGATATCC TCAAAGCCAT GGCCAAGTCG ATGGGCGTCA AGTTCGAGGC AGTGTCCACC
GCCTATGACG GCATCATCCC GGCCCTGCTG ACCGACAAGT TCGACATGAT CGGCAGCGGC
ATGACCCTGA CCCAGGAGCG CAACCTGCGC CTGAACTTCA GCGAACCCTT CATCGTGGTT
GGTCAGACCC TGCTGATCCG CAAAGAGCTG GCTGGCGAGA TCAAGTCGTA CAAGGACCTG
AACAACGAGA AGTACCGCCT GACGTCCAAG CTGGGCACCA CCGGCGAAAT GGTTTCCAAG
AAGTTGATCG GCAAAGCCAA GTACCACGGC TACGACAACG AGCAGGAAGC GGTGATGGAC
GTGGTCAACG GCAAGGCCGA TGCCTTCGTC TATGACGCCC CATACAACGT GGTTGCCGTG
GAAAAAGCCG GCGCCGGCAA GCTGCTGTTC CTCGAAGAGC CCTTCACCTA CGAGCCGCTG
GCCTTCGGCC TGAAGAAAGG CGACTACGAC AGCATCAACT TCATCAACAA CTTCCTGCAC
CAGATCAAGC ATGACGGGAC CTACGATCGT ATCCACGACA AGTGGTTCAA GAACAAGGAC
TGGCTGAAGG AAATGGAATA A
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| Protein sequence | MIKKYLSRLL VGVTALVAVT AAQAGAIDDA VKRGTLRVGM DPTYMPFQMT NKRGEIIGFE
VDILKAMAKS MGVKFEAVST AYDGIIPALL TDKFDMIGSG MTLTQERNLR LNFSEPFIVV
GQTLLIRKEL AGEIKSYKDL NNEKYRLTSK LGTTGEMVSK KLIGKAKYHG YDNEQEAVMD
VVNGKADAFV YDAPYNVVAV EKAGAGKLLF LEEPFTYEPL AFGLKKGDYD SINFINNFLH
QIKHDGTYDR IHDKWFKNKD WLKEME
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