| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5054 |
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| Symbol | |
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| ID | 5872869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5645062 |
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| End bp | 5645913 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641550192 |
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| Product | poly(3-hydroxyalkanoate) depolymerase |
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| Protein accession | YP_001671274 |
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| Protein GI | 167036043 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR02240] poly(3-hydroxyalkanoate) depolymerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAAC CCTACATTTT CAGGACCGTC GAGCTGGACG ACCAGTCCAT CCGCACCGCC
GTCCGCCCGG GCAAGCCGCA CCTGACGCCG TTGCTGATCT TCAACGGCAT CGGCGCCAAC
CTGGAGCTGG TGTTTCCGTT CATCGAAGCA TTGGACCCGG ACCTGGAAGT CATCGCTTTC
GACGTGCCCG GTGTCGGTGG CTCGTCCACC CCACGCCACC CGTATCGCTT CCCTGGGCTG
GCCAAGCTGA CGGCACGGAT GCTCGACTAC CTCGACTACG GCCAGGTCAA CGTCATCGGC
GTGTCCTGGG GCGGCGCCCT GGCCCAGCAG TTCGCGCACG ACTACCCCGA GCGCTGCAAG
AAGCTGGTGC TGGCCGCCAC CGCTGCTGGC GCGGTCATGG TGCCAGGCAA GCCCAAGGTG
CTGTGGATGA TGGCCAGCCC CCGCCGCTAC GTGCAGCCGT CGCATGTCAT ACGCATTGCG
CCGATGATCT ATGGCGGCGG CTTCCGGCGC GACCCGGACC TGGCCATGCA CCATGCCGCC
AAGGTGCGCT CTGGCGGCAA GCTGGGTTAC TACTGGCAGC TGTTCGCCGG GCTTGGCTGG
ACCAGCATCC ACTGGCTGCA CAAGATCCAG CAGCCCACCC TGGTATTGGC CGGCGACGAC
GACCCGCTGA TCCCGCTGAT CAACATGCGC CTGCTGGCCT GGCGGATTCC CAATGCCCAG
CTACACATTA TCGACGACGG CCATTTGTTC CTGATCACCC GGGCCGAGGC CGTCGCCCCC
ATCATCATGA AGTTTCTGCA GCAAGAACGT CAGCGCGCAG TCATGCACCC TCGCCCGGCT
TCGGGCGTGT AG
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| Protein sequence | MPQPYIFRTV ELDDQSIRTA VRPGKPHLTP LLIFNGIGAN LELVFPFIEA LDPDLEVIAF
DVPGVGGSST PRHPYRFPGL AKLTARMLDY LDYGQVNVIG VSWGGALAQQ FAHDYPERCK
KLVLAATAAG AVMVPGKPKV LWMMASPRRY VQPSHVIRIA PMIYGGGFRR DPDLAMHHAA
KVRSGGKLGY YWQLFAGLGW TSIHWLHKIQ QPTLVLAGDD DPLIPLINMR LLAWRIPNAQ
LHIIDDGHLF LITRAEAVAP IIMKFLQQER QRAVMHPRPA SGV
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