| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5044 |
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| Symbol | |
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| ID | 5872859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5635457 |
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| End bp | 5636362 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641550182 |
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| Product | TonB family protein |
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| Protein accession | YP_001671264 |
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| Protein GI | 167036033 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.805089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTGC CCGCTGACAT CCCTGCCGAC CTGCTGCCTC CCCGTGTTCG CCCGGTGGAC
CGGCTCGGCT TCACCCTGTT TCTGGCTGCC CTGGTGCACC TGGCGCTGAT TCTTGGCGTC
GGCTTCACCG TGGTCAAGCC TGCCGAAATT CGCCACACCA TGGACATCAC CCTGGCCACC
TTCAAAAGCG AGAAAGCGCC CGAGAAGGCC GATTTCCAGG CCCAGGACAA CCAGCAGGGC
AGCGGCACCC TGGACAAGAA GGCGGTCCCC ACGACCACCG AACTGGCCCC GTTCCAGGAC
AGCAAGATCA ACAAGATTAC CCCACCACCC GCCGCCAGGC CCGAAGTGGT ACCCCCGCCT
ACCCCGCAGA AGTCGGCGGT AGTGACGACC GCGCCCAAGC CGCAAAAGGT CGAACCCAAG
CCCAAGGAAA GCAAGGCGCA GCCCAAACCG GCCGCGCCTG CGCCAGACTT CGACAGCTCG
CAGCTGTCCA GCCAGATCGC CAGCCTGGAG GCGGAGCTTT CCAACGAACA GCAGATGTAC
GCCAAACGCC CGCGCATTCA CCGCCTGAAC GCCGCCTCGA CCATGCGCGA CAAGGGCGCC
TGGTACAAGG AAGAGTGGCG CAAGAAGGTC GAGCGGGTGG GCAACCTGAA CTACCCCGAC
GAAGCGCGCC GGCAGCAGAT TTACGGCAAC TTGCGCATGA TGGTGTCGAT CAACCGTGAT
GGCTCGCTGT ACGAGGTGCT GGTGCTGGAG TCGTCCGGGC AACCGGTGCT GGACCAGGCG
GCACAGCGCA TCGTAAGGCT GGCGGCGCCG TTTGCACCGT TTACTGGGGA TTTGGCTGAG
TTTGACCGGT TGGAGATTAT TCGGACATGG CGGTTTGCCC GTGGGGACCG TTTGTCCAGT
AATTGA
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| Protein sequence | MTLPADIPAD LLPPRVRPVD RLGFTLFLAA LVHLALILGV GFTVVKPAEI RHTMDITLAT
FKSEKAPEKA DFQAQDNQQG SGTLDKKAVP TTTELAPFQD SKINKITPPP AARPEVVPPP
TPQKSAVVTT APKPQKVEPK PKESKAQPKP AAPAPDFDSS QLSSQIASLE AELSNEQQMY
AKRPRIHRLN AASTMRDKGA WYKEEWRKKV ERVGNLNYPD EARRQQIYGN LRMMVSINRD
GSLYEVLVLE SSGQPVLDQA AQRIVRLAAP FAPFTGDLAE FDRLEIIRTW RFARGDRLSS
N
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