Gene PputGB1_5042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5042 
Symbol 
ID5872857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5633856 
End bp5634257 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content61% 
IMG OID641550180 
Productresponse regulator receiver protein 
Protein accessionYP_001671262 
Protein GI167036031 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAAC CCCTGAAGGT GATGGTGATC GACGATTCCC GCACGATCCG CCGCACCGCA 
CAGATGTTGC TCGGTGAAGC GGGCTGCGAG GTGATCACCG CCAGCGATGG CTTCGATGCC
CTGGCCAAGA TCGTCGACCA CCAGCCCAGC ATCATTTTCG TCGATGTGCT GATGCCGCGC
CTGGACGGTT ACCAGACCTG CGCGGTCATC AAGCACAACA GTGTCTTCAA GGACACCCCG
GTGATCCTGC TGTCGTCGCG CGACGGCCTG TTCGACAAGG CTCGTGGCCG GGTGGTCGGT
TCCGATCAGT TCCTGACCAA GCCGTTCAGC AAGGAAGAAT TGCTCGACGC GATCCGCGCC
CACGTGCCCG GGTTTGCCGT ACCTCAACAA CACGCACCCT GA
 
Protein sequence
MEQPLKVMVI DDSRTIRRTA QMLLGEAGCE VITASDGFDA LAKIVDHQPS IIFVDVLMPR 
LDGYQTCAVI KHNSVFKDTP VILLSSRDGL FDKARGRVVG SDQFLTKPFS KEELLDAIRA
HVPGFAVPQQ HAP