| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5038 |
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| Symbol | |
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| ID | 5872853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5625854 |
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| End bp | 5630797 |
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| Gene Length | 4944 bp |
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| Protein Length | 1647 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641550176 |
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| Product | CheA signal transduction histidine kinase |
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| Protein accession | YP_001671258 |
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| Protein GI | 167036027 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTCG CTGCTGTAAG CCCCGAGCGC CACGAAACGG TGGCGCTGGC CTGGACCAAG
GCCGCCATTC TCGATTGCCT GGGCCAGGCA CGGCAGGCGC TGGAGCGCTT CGCCGGCGAA
CCGGGCGACT TGTCGATGCT GGCCTTCGTG GTCGACAACT TGCACCAGGT GCATGGCTGC
CTGCGCATGC TCGAGCTGCG TGGCGCCACG CGCCTGGCAG AGGAACTGGA GCTGTTCGCC
AAGGCGTTGG CCGATGGCCA GGTCAGCCCA CGGGGCGATT GCCTGGGTGC GCTGTTCCGT
GGTCTGGAGC AGTTGCCGTC GTACCTTGAA CGCTTGCGCG GCGCCCGCCA CGATCTGCCG
TTGGTGATGC TGCCACTGCT CAACCAGCTG CGCGCCTGCC GTGGCATCGA GCCGCTAGCC
CAGGCAAGCC TGATAAGTGG TGCTGCGCAA CGCTTTGCCG GGTCCGACGA CCTGGCCAAC
CTCGACCTGT CGTTGGGCAA CTGGCGCGAT CAATTGCAGG CCGGGCCGGG CCGCGATGCC
CTGCGCTCGG TGGTGACCGC GCTCTGCGAC GACCTCATGC GCATCAAGGA GCGCCTGGAC
CAGTTCGTGC GCAGCGATCG TCAGCACAGC GAGCAGCTCG ATGCCCTGCT GGCGCCGCTG
CGCCACGTGG CCGATACCCT GGCTGTACTG GGCTTCCAAC AACCACGGCG GGTGATCATC
GACCAGGTGC TGGCGCTGCA GGCCTTGGCC CAGGGCGAGC GGTCGGTGGA CGATGCGGTG
CTTATGGATG TGGCGGGGGC CTTGCTGTAC GTGGAGGCTT CGCTGAACGG CATGGTCGGC
CCACTGGAGG AAAACGGCCA GGGTAGCCTG CCGGGCTCGG ACCTGGCCGA GATACGCCAG
CTGGTGTTGA GCGAGTCGCT GAATGTATTG CAGCAGGCCA AGGACCTGAT CGGCGACTAC
CTGGAGTCCG ACTGGCCTCG GCAGCGCCTG CAACCTTTGC CAGGGCTATT GCAGCAGGTT
CGCGGGGCTT TGGCCATGTT GATGTTGCCC GCCGTGGCCG AGCTGTTTGC CGGCTGCGCA
AGTTATGTGC AGCGTTGGTT GCAGCACCTG GACGAAGAGC CGCCCGCCGA TGAGCTGACG
CACCTGGCCG AGGCGCTGAG TGCTGCCGAG TGTTACCTGC AATGGCGGGT GGCCGACCCG
TTGGCGGATG GCCAGCCCTT CATCGACAGG GCGCGTGCCA GTCTGGCGGC GCTGGGCGTG
CACTGTGCGC AGGCTGACGC CCGAGCGGGC CTGGGAGCCG ATGGCGATGG CATCGACGAC
GAACTGCGCG AAGTGTTTCT CGAGGAAGCT GGCGAGTTGC TCCCGGAAAT CGAGCGTCAC
TGGCTGCGCT GGCGTGCGGA CAACCAGCAG CGTGGGGCGC TGGGGGAAGT ACGTCGTGCG
TTGCATACCC TCAAAGGCAG CGGTCGCATG GTGCATGCCG AGGCGGTGGC TGAACTGGCT
TGGGGCGCCG AGCACCTGCT GAACCGGGTA CTGGAAGGCC GCAGCGTGCT CAGCCCGGAG
GGCGTGGTGG CCCTGCAGCA GGTGTTTGTC CATCTGCCCG ATTTGCTGGC CGACTTTGCC
GCCGGCCAGC TGCCGCAACT GACCGAAATC GAGCAACTGG CTGGGCACCT GCACGCCCTG
GCTGAAAACG ACGCACCAGC CACGGCCAAT ATCGATGGCC TGGATCCGCA GTTACTGGAT
ATTTTCCGCA GTGAAGCGCA GGGCCACTTG GCCAGCCTCG ATGCCTTCCT GCAGGGCGCC
GATGGTCACG ATACGCCGGT CAGCGATGGC CTGCAGCGTG CCCTGCACAC GCTCAAAGGC
AGTGCCGCCA TGGCCGGGGT GATGCCGGTC GCCGAACTCG CCACCGCCTT CGACCGCTTG
GCCCGTGAGT ACAAGGGGCA TCAACTGCCG CTGCAAATGG CCGAGATGGA ATGGTTGGAA
GCCGCGCGCT CGCTGTTTCA TCTGGGCCTG GCGCAACTTG ACAGTACGCC GCTGGCTGCC
ATACCCGGCG CTGCGGAGCT GATCGAGCAG GTTGGCCAGG CAGTGGACGG CCGCCTGGCC
AGCTTGCATG ACGACCCGCA GCACGCGCGG CGCAGCAAGC GCGACCCGCA GTTGGTCGCC
AGTTTCCTGG CCCAGGCCAT GGACATTCTG CTCAATGCCG AGTCGGTGCT GTCGCGCTGG
CAGCAGCAGC CAGGTCAGCG TGACGCACTG GACACCCTGC TTGATGAAAT GACCACCCTG
GGCCATGCCG CTCACCTGGC TGACCTGTGG CAGATGGATG ATGTGTGCGA GGCCTTGCTC
GACCTGTACG GTGCAGTAGA AGAGGGCAGC CTGCCCGCCG ATGCACGCTT CTTCGCCCAG
GCGCAGCACG CCCATGAAGC CCTGCTGGAC ATGCTCGACG AAGTGGCGGC TGGACAGGAT
CTGGCGCCGC GCCCAGAACT GGTTGGCAGC CTGCGCAACC TGTTGGACCA GGCCCTGCCC
CCGGATGCAA CCGGCCTTGT GGGCATTGAT ACGGTCACAC CGCTGCACCC GGACATGGAC
CTGACCGATA CCTTGGGGCT GGGGCACCCG TCGTTGCTGC CGGGGGCCGC CGAGCCGCTG
GTCGAGAAGC CGGAAAACCC CGGCGAAGAA CTGCTGGAAG TGTTCCTCGA AGAAAGCTCG
GACATCGTCG AAAGCGCCGC AGCAGCCCTG GCGCGCTGGC AGGCCGACCC GCGCAACAGC
GTCGAGGTGG ACAACCTGAT GCGCGACCTG CACACCCTCA AGGGCGTGGC GCGCATGGTC
GAAATCGCCC CGATCGGCGA CCTGGCCCAC GAACTGGAGT TTCTCTACGA ACTGTTGGCC
GCCGGCCGTT TGCCACCGAG CGCGCCACTG TTCGCCCTGC TACAGAACTG CCACGACCGT
CTGGCGCACA TGCTCGATGC CGTGCGCCTG GGGCAGCCGC TGCATGCTGC CACGGCGCTG
ATCGACTACA TTCGCAATTT CAGCAGCGCG GCACTGACCG ACAGTGCCGC GGGCCAGGGG
GCGCTGGAGG CTGCAACCGC CGAAGTGCCG GCAGCGGCGC CAGAGCGGGC GCCGGGCGAC
ATGGTCAAGG TCGATGCCGA GCTGCTCGAC GACCTGGGTA ACCTGGCCGG CGAGCACTCG
ATCATTCGTG GGCGCATCGA GCAGCAGGTC AACGATGCGC AGTTCACCCT CAACGAGATG
GAAACCACCC TCGAGCGCAT GCGCGACCAG TTGCTGCGCC TGGACGTCGA GACCCAAGGG
CGAATTTCCA GCCGTCAGCA GTTCGAAGGC GATGCCTATG ACGATTTCGA CCCGCTGGAA
ATGGACCGCC ATTCGCAGCT GCAGCAACTG TCGAGGGCCC TGTTCGAGTC TGCCTCGGAC
CTGCTCGACC TGAAGGAAAC CCTGGCCCAG CGCGCTCAGG AGGCGTATAG CCTGCTGCAG
CAGCAGGCGC GGGTGAACAG CCAGTTGCAG GAAGGCCTGA CCGCCACCCT GATGGTGCCG
TTCGAACGCC TGGTGCCGCG CTTGCAGCGC GTGGTGCGGC AGGTGGCCAG CGAGCTGGGC
AAACAGGTGG AGCTGGTGGT CGGCAATGCC GAGGGTGAGC TGGACCGCAG CGTGCTCGAA
CGCATGGTGG CGCCGCTGGA GCATATGCTG CGCAACGCCG TCGACCATGG CCTGGAAAGC
CGCGAAATGC GCCTGGCTGC CGGCAAGCCG GAGCAGGGCA CCATTCACCT GAATTTGTTG
CACGAAGGTG CCGATATCGT CATCGAAATG ACCGATGACG GTGCCGGCGT GCCACTGGAG
GCGGTGCGGC GCAAGGCCAT CAAACGCGGC CTGCTGGACC CGCAGGCCCA GTTGAGCGAT
CACGAGATCC TGCAGTTCAT CCTGCGCCCG GGCTTTTCCA CCGCCGAAAA GATCACCCAA
ATTTCCGGTC GCGGGCTGGG CATGGATGTG GTGCATGAGG AGGTCAAGCA ACTAGGGGGC
TCGATGAGCA TCGAGTCGGC CCAGGGCAAA GGCGCGCGCT TCTTGATCCG CCTGCCGTTC
ACGGTGTCCA TCAACCGCGC GTTGATGGTG CACCTGGGCG AAGAGCAGTA CGCAATTGGG
CTCAATACCA TCGAAGGTAT CGTTCGTGTG CCGCCGGCCG AGCTGGCGGC GTGCTACCAG
TTGGACGCGC CACGTTATGT CTACGCCGGC CACGAATACG AGCTGCGCTA CCTGGGCGAG
TTGCTGCAAG GTGTGCCACG CCCGACGCTG CTGGGGCAGA GCGTGCCATT GCCGGTGCTG
CTGGTGCATG CCAAGGAGCA ATCGTTCGCC ATCCAGGCCG ACGGCCTGTC GCCCAGCCGC
GAGATCGTGG TGAAGAGCCT GGGGCCGCAG TTTGCCGCGG TTGCCGGGTT GTCGGGGGCA
ACGTTGCTGG GCGATGGTCG GGTGGTGTTG ATTCTTGACC TGCTGGGCCA GCTGCGCGGC
CAGCAGCGAC GGCTGGCTCG CCTGCCCGCT GGTGGCAGCC AACGCCAACT GCTTGGCCCG
GCACCACGCC GCCCCTTGCT GGTGATGGTG GTGGACGATT CGGTAACCGT GCGCAAGGTC
ACCAGCCGCC TGCTGGAGCG CCACGGCATG AGCGTGCTCA CAGCCAAAGA CGGTGTTGAC
GCCATGGCCT TGCTGGAAGA GCACCGGCCC GACGTGTTGC TACTGGACAT CGAGATGCCA
CGTATGGATG GTTTCGAGGT GGCTACACGT ATCCGCCGTG ACGCCCGCCT GAAGGACCTG
CCTATCATCA TGATCACTTC GCGTACCGGG CAGAAGCACC GCGACCGCGC CATGGCCATC
GGCGTCAACG AGTACCTGGG CAAGCCGTAC CAGGAGTCGC TGTTGTTGCA GAGCATCGCC
CATTGGAGCC AGACCCATGC TTGA
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| Protein sequence | MAVAAVSPER HETVALAWTK AAILDCLGQA RQALERFAGE PGDLSMLAFV VDNLHQVHGC
LRMLELRGAT RLAEELELFA KALADGQVSP RGDCLGALFR GLEQLPSYLE RLRGARHDLP
LVMLPLLNQL RACRGIEPLA QASLISGAAQ RFAGSDDLAN LDLSLGNWRD QLQAGPGRDA
LRSVVTALCD DLMRIKERLD QFVRSDRQHS EQLDALLAPL RHVADTLAVL GFQQPRRVII
DQVLALQALA QGERSVDDAV LMDVAGALLY VEASLNGMVG PLEENGQGSL PGSDLAEIRQ
LVLSESLNVL QQAKDLIGDY LESDWPRQRL QPLPGLLQQV RGALAMLMLP AVAELFAGCA
SYVQRWLQHL DEEPPADELT HLAEALSAAE CYLQWRVADP LADGQPFIDR ARASLAALGV
HCAQADARAG LGADGDGIDD ELREVFLEEA GELLPEIERH WLRWRADNQQ RGALGEVRRA
LHTLKGSGRM VHAEAVAELA WGAEHLLNRV LEGRSVLSPE GVVALQQVFV HLPDLLADFA
AGQLPQLTEI EQLAGHLHAL AENDAPATAN IDGLDPQLLD IFRSEAQGHL ASLDAFLQGA
DGHDTPVSDG LQRALHTLKG SAAMAGVMPV AELATAFDRL AREYKGHQLP LQMAEMEWLE
AARSLFHLGL AQLDSTPLAA IPGAAELIEQ VGQAVDGRLA SLHDDPQHAR RSKRDPQLVA
SFLAQAMDIL LNAESVLSRW QQQPGQRDAL DTLLDEMTTL GHAAHLADLW QMDDVCEALL
DLYGAVEEGS LPADARFFAQ AQHAHEALLD MLDEVAAGQD LAPRPELVGS LRNLLDQALP
PDATGLVGID TVTPLHPDMD LTDTLGLGHP SLLPGAAEPL VEKPENPGEE LLEVFLEESS
DIVESAAAAL ARWQADPRNS VEVDNLMRDL HTLKGVARMV EIAPIGDLAH ELEFLYELLA
AGRLPPSAPL FALLQNCHDR LAHMLDAVRL GQPLHAATAL IDYIRNFSSA ALTDSAAGQG
ALEAATAEVP AAAPERAPGD MVKVDAELLD DLGNLAGEHS IIRGRIEQQV NDAQFTLNEM
ETTLERMRDQ LLRLDVETQG RISSRQQFEG DAYDDFDPLE MDRHSQLQQL SRALFESASD
LLDLKETLAQ RAQEAYSLLQ QQARVNSQLQ EGLTATLMVP FERLVPRLQR VVRQVASELG
KQVELVVGNA EGELDRSVLE RMVAPLEHML RNAVDHGLES REMRLAAGKP EQGTIHLNLL
HEGADIVIEM TDDGAGVPLE AVRRKAIKRG LLDPQAQLSD HEILQFILRP GFSTAEKITQ
ISGRGLGMDV VHEEVKQLGG SMSIESAQGK GARFLIRLPF TVSINRALMV HLGEEQYAIG
LNTIEGIVRV PPAELAACYQ LDAPRYVYAG HEYELRYLGE LLQGVPRPTL LGQSVPLPVL
LVHAKEQSFA IQADGLSPSR EIVVKSLGPQ FAAVAGLSGA TLLGDGRVVL ILDLLGQLRG
QQRRLARLPA GGSQRQLLGP APRRPLLVMV VDDSVTVRKV TSRLLERHGM SVLTAKDGVD
AMALLEEHRP DVLLLDIEMP RMDGFEVATR IRRDARLKDL PIIMITSRTG QKHRDRAMAI
GVNEYLGKPY QESLLLQSIA HWSQTHA
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