Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5037 |
Symbol | |
ID | 5872852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5625388 |
End bp | 5625861 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641550175 |
Product | CheW domain-containing protein |
Protein accession | YP_001671257 |
Protein GI | 167036026 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.147092 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTGAAC TGATTGCCGG CCAACGCAGC AGCCTGACCG GGCTGTTGCT GCCGTTGGGT GACCGCACCC TGGTGCTGCC CAACGTGGCG GTGGCCGAGT TGAGCGGGCA GCGCAACCTG GTGTGTCAGC ACGGTGATCC CGCTTGGCAC CTGGGCTGGA TCGACTGGCG CCAGCAACGC TTGCCGCTGA TTGGTTTCGA GGCGGCGTGC GGTGGCGAGA CGCCGTGCGG TGAGCGGGCA CGCGTAGTGG TGCTCAATGC CTTGGGCGAT ACCGGGCTGC GTTACCTGGC GCTGTTGCTG CAGGACATCC CGCGTTCATG CAAGCTCGAC AGCCAGCTCA ACTATGTGGA CGTGGCACTG GGGCGCCTGG AGTTGGCGGC GGTGCAGGTG GGCGAGCAGG TGGCAAGGGT GCCGGACCTG GTTGCATTGG AAAGGCTGGT GCGTGACGCG GATCTGCAAC CTGATCTTGG GTAG
|
Protein sequence | MLELIAGQRS SLTGLLLPLG DRTLVLPNVA VAELSGQRNL VCQHGDPAWH LGWIDWRQQR LPLIGFEAAC GGETPCGERA RVVVLNALGD TGLRYLALLL QDIPRSCKLD SQLNYVDVAL GRLELAAVQV GEQVARVPDL VALERLVRDA DLQPDLG
|
| |