| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5036 |
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| Symbol | |
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| ID | 5872851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5624709 |
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| End bp | 5625326 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641550174 |
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| Product | hemolysin III family channel protein |
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| Protein accession | YP_001671256 |
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| Protein GI | 167036025 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.406448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATTACG GTGAACGCTT CAACGCCTGG ACTCACCTGG TCGGTGCTGT CCTCGCCTGT
ATCGGTGCCA TCTGGCTGAT CGTGGTCGCG GGCCTGCAAG GCGACCCGTG GAAGATCGTC
AGTTTCTCCA TCTACGGCAG CACGCTGCTG TTGCTGTACA GCATTTCCAC CCTGTACCAC
AGCACCCGCG GGCGGGCGAA GGTGATCATG CGCAAGCTCG ATCACCTGTC GATCTACCTG
TTGATCGCCG GCAGCTACAC GCCGTTTTGC CTGGTCAGCC TGCGCGGCCC GTGGGGCTGG
AGCCTGTTCG GTGTGGTCTG GGGGCTGGCG GTGATCGGCA TGTTGCAGGA GATCAAGCCG
CGCTCCGAGG CGCGGATCCT GTCGATCATT ATTTATGCCG TGATGGGCTG GATCGTGCTG
GTTGCAGTCA AGCCATTGCT CAATACGCTG GGCACCGCAG GTTTTACCTG GCTGGCGGCC
GGCGGGGTGT TCTACACCGT CGGCATCATC TTCTTCGCCT TCGATAGCCG TTTCCGCCAC
TGGCACGGCA TCTGGCACCT CTTCGTAATT GCCGGCAGCC TCATGCACTT CGTGGCGGTG
TCGTTCTATG TGCGTTAG
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| Protein sequence | MYYGERFNAW THLVGAVLAC IGAIWLIVVA GLQGDPWKIV SFSIYGSTLL LLYSISTLYH
STRGRAKVIM RKLDHLSIYL LIAGSYTPFC LVSLRGPWGW SLFGVVWGLA VIGMLQEIKP
RSEARILSII IYAVMGWIVL VAVKPLLNTL GTAGFTWLAA GGVFYTVGII FFAFDSRFRH
WHGIWHLFVI AGSLMHFVAV SFYVR
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