Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5030 |
Symbol | |
ID | 5872845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5618412 |
End bp | 5618990 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641550168 |
Product | hypothetical protein |
Protein accession | YP_001671250 |
Protein GI | 167036019 |
COG category | [S] Function unknown |
COG ID | [COG2353] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.727283 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAAAA AGACTTTTGC CGCTCTGGCG CTCGGTACCG CTCTGCTCTC CGCTGGCCAG GCCATGGCTG CCGAGTACAA GATCGACAAG GAAGGCCAGC ACGCGTTCGT TGACTGGAAA ATCAGCCACC TGGGCTACAG CTTCATCCAC GGTACCTTCA AGGACTTCGA CGGCAACTTC ACCTGGGACA GCGCCAAGCC TGAAGCCAGC AAGATCAGCG TCGACCTGAA GACCGCCAGC CTGTGGTCGA ACCACGCCGA GCGTGACAAG CACATCGCCA GCGCCGACTT CCTCGATGTG AAGAAGTATC CTGAAGCCAA GTTCGTCTCT ACTGCCGTCA AGTCGACTGG CGAAAAGACT GCTGACGTTA CGGGCGACCT GACCATGCAC GGCGTAACCA AGCCGGTCAC CTTCAAGGCA ACCTTCAACG GTGAAGGCAA GGACCCATGG GGCGGTGAGC GCGCTGGTTT CAACGCCACC ACCACCCTGA ACCTGAATGA CTTCGGCATC AAAGGCCCAG GCGCTACTTC GCAGACGCTG GACCTGGATA TCAGTGTCGA AGGTGTGAAG CAGAAGTAA
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Protein sequence | MLKKTFAALA LGTALLSAGQ AMAAEYKIDK EGQHAFVDWK ISHLGYSFIH GTFKDFDGNF TWDSAKPEAS KISVDLKTAS LWSNHAERDK HIASADFLDV KKYPEAKFVS TAVKSTGEKT ADVTGDLTMH GVTKPVTFKA TFNGEGKDPW GGERAGFNAT TTLNLNDFGI KGPGATSQTL DLDISVEGVK QK
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