| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5029 |
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| Symbol | |
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| ID | 5872844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5616446 |
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| End bp | 5618326 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641550167 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001671249 |
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| Protein GI | 167036018 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTTG CTTCCCTCGG TCTCTCCGAG GCTCTTGTCC GCGCTATCGA GGCTGCGGGC
TACACCCAGC CGACCCCCGT GCAACAGCGG GCCATTCCCG CCGTGTTGCA AGGCCGCGAC
CTGATGGTTG CCGCACAGAC AGGTACGGGT AAAACCGGCG GCTTCGCCCT GCCGATCCTC
GAGCGCCTGT TCCCGGCCGG CCACCCCGAC AAGTCGCAGC GTCACGGCCC GCGCCAGCCC
CGCGTGCTGG TCCTGACCCC GACCCGCGAA CTGGCAGCCC AGGTGCATGA CAGCTTCAAG
GTCTATGCCC GTGACCTGCC ACTGGTCAGC GCCTGCATCT TCGGCGGCGT TGGCATGAAC
CCGCAGATCC AGGCCATTGC CAAAGGCGTT GACGTGCTGG TCGCCTGCCC AGGCCGCCTG
CTCGACCTGG CCGGCCAAGG CAAGGTCGAC CTGGCCCACG TGGAAATCCT GGTGCTCGAC
GAAGCCGACC GCATGCTCGA CATGGGCTTC ATTCACGACG TCAAGAAGGT CCTCGCCCGC
CTGCCGGCCA AGCGCCAGAA CCTGCTGTTC TCGGCCACCT TCTCCAAGGA CATCACCGAC
CTCGCCGACA AGCTTCTGCA CAACCCGGAG CGTATCGAGG TCACGCCGCC GAACACCACC
GTCGAGCGTA TCGAGCAGCG CGTCTATCGC CTGCCCGCCA GCCACAAGCG TGCACTGCTG
GCACACCTGA TCACCCAGGG CGCCTGGGAA CAGGTACTGG TGTTCACCCG GACCAAGCAC
GGCGCCAACC GCTTGGCCGA GTATCTGGAA AAGCACGGCC TGACCGCCGC TGCAATCCAC
GGCAACAAAA GCCAGAACGC CCGCACCAAA GCCCTGGCCG ATTTCAAGGC CAACAGTGTG
CGCGTGCTGG TCGCCACCGA CATCGCCGCC CGTGGCCTGG ACATCGACCA ACTGCCGCAC
GTGGTCAACT TCGAGCTACC GAATGTCGAG GAAGATTACG TTCACCGCAT CGGCCGTACC
GGCCGTGCCG GTCGCTCGGG CGAAGCCATT TCCATGGTCG CGCCAGATGA AGAGAAGCTG
CTCAAGAGCA TCGAGCGGGT GACCAAGCAA CGCATCCAGG ATGGCGACCT GATGGGCTTC
GACGCCAGCC AGGTAGAAGC CGAAAAGCCT GAAGTGCGCG AGCGCCCGCA GAACAGCGGC
CGCGGTGGCC GCAACCAGCA GGGCCGCGGC GAAGGCGGTA AAGACGCCAA CGGCGGCCGC
AAGGACAAAG GCAAGGCCAA GCAGCAAGCT GCAGAAAAGC CGGCCGACAA GGAAAACAGC
GGCGACAAGC AACAGCAGCC GCGCAAGCCG CGTGACAAGA AGCCACGCCA ACAGCAGCAG
GCCAGCAGCA ACAGCGTGCC GAAAGTACCG GCCGACCGCG ACCCGGAAGA ATTCCTGGAC
GACGATGTCG ACAACTTCGG TAACCGTGCC GACTACGTCA GCCCGTACCA AGGCAAGAAC
CAAGGCCGCA ATCGCCGCCC GGGTGGCGGT GCAGGCCAGG GCCAGAATAG CGGTCAACGC
AGCAACGCTG GGGGCCAGGG CCAAGCTCGC AGTGGCGGCC AGCAGCGTAG TGGCGGCAGC
GGTGGTGGCG GCGAAAAGCG CCCTGCCCGC GCCAACAACG GTGGCGGTGC CCGTCGTGAC
GGCGGTGGCC GTGGTCGCCC AGCCCGTGAT GACGCAGCCC GGCAGGAGCC TGCCGTGCGT
AACCCACGCC AGCCAGAAAA ACAACCGGTG ATCATCCGCA AGGAATCCAA GCTCGACCGT
TACCCAACGC CTGAGCAGTT GGATGACGTG CCGACCCGAC CACGCGGTGA GCGCCCGGCC
TTGTTGACCC GAAAAGGCTG A
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| Protein sequence | MSFASLGLSE ALVRAIEAAG YTQPTPVQQR AIPAVLQGRD LMVAAQTGTG KTGGFALPIL
ERLFPAGHPD KSQRHGPRQP RVLVLTPTRE LAAQVHDSFK VYARDLPLVS ACIFGGVGMN
PQIQAIAKGV DVLVACPGRL LDLAGQGKVD LAHVEILVLD EADRMLDMGF IHDVKKVLAR
LPAKRQNLLF SATFSKDITD LADKLLHNPE RIEVTPPNTT VERIEQRVYR LPASHKRALL
AHLITQGAWE QVLVFTRTKH GANRLAEYLE KHGLTAAAIH GNKSQNARTK ALADFKANSV
RVLVATDIAA RGLDIDQLPH VVNFELPNVE EDYVHRIGRT GRAGRSGEAI SMVAPDEEKL
LKSIERVTKQ RIQDGDLMGF DASQVEAEKP EVRERPQNSG RGGRNQQGRG EGGKDANGGR
KDKGKAKQQA AEKPADKENS GDKQQQPRKP RDKKPRQQQQ ASSNSVPKVP ADRDPEEFLD
DDVDNFGNRA DYVSPYQGKN QGRNRRPGGG AGQGQNSGQR SNAGGQGQAR SGGQQRSGGS
GGGGEKRPAR ANNGGGARRD GGGRGRPARD DAARQEPAVR NPRQPEKQPV IIRKESKLDR
YPTPEQLDDV PTRPRGERPA LLTRKG
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