Gene PputGB1_5024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5024 
Symbol 
ID5872839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5611143 
End bp5611544 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content59% 
IMG OID641550162 
Productthioesterase superfamily protein 
Protein accessionYP_001671244 
Protein GI167036013 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTTC ACACCCGCAA ATGGGTTAAA CCCGAAGACC TCAACCCCAA TGGCACCCTG 
TTCGGTGGCA GCCTGTTGCG CTGGATCGAC GAAGAGGCGG CGATCTACGC CATCGTCCAG
CTGGGCAACC AGCGCGTGGT GACCAAGTAC ATGTCGGAAA TCAACTTCGT CAGTGCGTCG
CGCCAGGGCG ACATCATCGA GCTGGGCATT ACCGCCACCG AGTTCGGCCG CACCTCGATC
ACCCTCAAGT GCGAAGTGCG CAACAAGATC ACCCGCAAGA GTATCCTGAC CGTCGACAAG
ATGGTGTTCG TAAACCTGGG TGAAGACGGC TTGCCGGCAG CCCATGGGCG CACCGAGATC
AAGTACGTGC AGGACCAGTT CCCGGATTCG GCAGTAGAGT GA
 
Protein sequence
MNFHTRKWVK PEDLNPNGTL FGGSLLRWID EEAAIYAIVQ LGNQRVVTKY MSEINFVSAS 
RQGDIIELGI TATEFGRTSI TLKCEVRNKI TRKSILTVDK MVFVNLGEDG LPAAHGRTEI
KYVQDQFPDS AVE