Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5024 |
Symbol | |
ID | 5872839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5611143 |
End bp | 5611544 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641550162 |
Product | thioesterase superfamily protein |
Protein accession | YP_001671244 |
Protein GI | 167036013 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACTTTC ACACCCGCAA ATGGGTTAAA CCCGAAGACC TCAACCCCAA TGGCACCCTG TTCGGTGGCA GCCTGTTGCG CTGGATCGAC GAAGAGGCGG CGATCTACGC CATCGTCCAG CTGGGCAACC AGCGCGTGGT GACCAAGTAC ATGTCGGAAA TCAACTTCGT CAGTGCGTCG CGCCAGGGCG ACATCATCGA GCTGGGCATT ACCGCCACCG AGTTCGGCCG CACCTCGATC ACCCTCAAGT GCGAAGTGCG CAACAAGATC ACCCGCAAGA GTATCCTGAC CGTCGACAAG ATGGTGTTCG TAAACCTGGG TGAAGACGGC TTGCCGGCAG CCCATGGGCG CACCGAGATC AAGTACGTGC AGGACCAGTT CCCGGATTCG GCAGTAGAGT GA
|
Protein sequence | MNFHTRKWVK PEDLNPNGTL FGGSLLRWID EEAAIYAIVQ LGNQRVVTKY MSEINFVSAS RQGDIIELGI TATEFGRTSI TLKCEVRNKI TRKSILTVDK MVFVNLGEDG LPAAHGRTEI KYVQDQFPDS AVE
|
| |