Gene PputGB1_5022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5022 
Symbol 
ID5872837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5608861 
End bp5609694 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content63% 
IMG OID641550160 
Producthypothetical protein 
Protein accessionYP_001671242 
Protein GI167036011 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.752327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGGCAA CATCCCTGGT GCTGGTCGCC GCCCTGCTGC ATGCGACCTG GAATACCCTG 
ATCAAATTCA GCGGTGAGCG CTTGCTGGTC ATCGCCAGCA TGGACACGGT GGCGCTTGCG
TTCGCGTTGC TGGCCGTGCC TTTCGTCGAT GTGCCACCTG CCGAAATCTG GCCCTGGCTG
ATCGCCTCCG CGTTGGCCGA GCAGCTGTAC CGCTATTTGC TGATCCAGGC CTACCGCGTG
GGTGACCTGG GGCTGGTCTA TCCTCTGATG CGCGGGCTGT CGCCGCTGGT GGTGCTGGGG
CTGACCCTGG CCTTTGCCGG GGAATCGCTG AGCCAGCAGC AGATCATCGG TATCCTGCTG
ATCCCCTGCG GCATGGCGTG CCTGTTGTGG CAGGGCGGCG GCGGTGACCG GCTGCCCTGG
TCGATGCTGC CGGTAGTCGC CTTGATTGGC CTGTGCATCG GCTGCTACAC CTGGTTCGAC
GGCCAAGCCG TGCGCCTATG GGGCAAACCG TGGGATTACC TGGTGTGGCT GACCCTGCTC
AGCGCCTGGC AGTTCCCGTT GCTGGCCAGC GTGGCGCGGC GAGCACCGTT CGTCCTGTTT
TGGCGAACGC AATGGCGTTT GGGTTTGGCG GTTGGGTTTT GCGTATTGTT CAGTTATGCC
CTGGTGTTGT GGGCCATGCA CCTGGGGTCG GTGGCCGAGG CGGCAGCGTT ACGGGAACTG
AGCGTGATTC TGGTGGTGCT GCTGGGTATG CGCTACCTCA AAGAACCTTT TGGCGGGCCG
AGACTCCTAG CTTGCGGGCT GGTCCTGGCA GGCACGCTGG TGATGAAGCT CTAA
 
Protein sequence
MLATSLVLVA ALLHATWNTL IKFSGERLLV IASMDTVALA FALLAVPFVD VPPAEIWPWL 
IASALAEQLY RYLLIQAYRV GDLGLVYPLM RGLSPLVVLG LTLAFAGESL SQQQIIGILL
IPCGMACLLW QGGGGDRLPW SMLPVVALIG LCIGCYTWFD GQAVRLWGKP WDYLVWLTLL
SAWQFPLLAS VARRAPFVLF WRTQWRLGLA VGFCVLFSYA LVLWAMHLGS VAEAAALREL
SVILVVLLGM RYLKEPFGGP RLLACGLVLA GTLVMKL