Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5022 |
Symbol | |
ID | 5872837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5608861 |
End bp | 5609694 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641550160 |
Product | hypothetical protein |
Protein accession | YP_001671242 |
Protein GI | 167036011 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.752327 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTTGGCAA CATCCCTGGT GCTGGTCGCC GCCCTGCTGC ATGCGACCTG GAATACCCTG ATCAAATTCA GCGGTGAGCG CTTGCTGGTC ATCGCCAGCA TGGACACGGT GGCGCTTGCG TTCGCGTTGC TGGCCGTGCC TTTCGTCGAT GTGCCACCTG CCGAAATCTG GCCCTGGCTG ATCGCCTCCG CGTTGGCCGA GCAGCTGTAC CGCTATTTGC TGATCCAGGC CTACCGCGTG GGTGACCTGG GGCTGGTCTA TCCTCTGATG CGCGGGCTGT CGCCGCTGGT GGTGCTGGGG CTGACCCTGG CCTTTGCCGG GGAATCGCTG AGCCAGCAGC AGATCATCGG TATCCTGCTG ATCCCCTGCG GCATGGCGTG CCTGTTGTGG CAGGGCGGCG GCGGTGACCG GCTGCCCTGG TCGATGCTGC CGGTAGTCGC CTTGATTGGC CTGTGCATCG GCTGCTACAC CTGGTTCGAC GGCCAAGCCG TGCGCCTATG GGGCAAACCG TGGGATTACC TGGTGTGGCT GACCCTGCTC AGCGCCTGGC AGTTCCCGTT GCTGGCCAGC GTGGCGCGGC GAGCACCGTT CGTCCTGTTT TGGCGAACGC AATGGCGTTT GGGTTTGGCG GTTGGGTTTT GCGTATTGTT CAGTTATGCC CTGGTGTTGT GGGCCATGCA CCTGGGGTCG GTGGCCGAGG CGGCAGCGTT ACGGGAACTG AGCGTGATTC TGGTGGTGCT GCTGGGTATG CGCTACCTCA AAGAACCTTT TGGCGGGCCG AGACTCCTAG CTTGCGGGCT GGTCCTGGCA GGCACGCTGG TGATGAAGCT CTAA
|
Protein sequence | MLATSLVLVA ALLHATWNTL IKFSGERLLV IASMDTVALA FALLAVPFVD VPPAEIWPWL IASALAEQLY RYLLIQAYRV GDLGLVYPLM RGLSPLVVLG LTLAFAGESL SQQQIIGILL IPCGMACLLW QGGGGDRLPW SMLPVVALIG LCIGCYTWFD GQAVRLWGKP WDYLVWLTLL SAWQFPLLAS VARRAPFVLF WRTQWRLGLA VGFCVLFSYA LVLWAMHLGS VAEAAALREL SVILVVLLGM RYLKEPFGGP RLLACGLVLA GTLVMKL
|
| |