| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5013 |
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| Symbol | |
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| ID | 5872828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5598546 |
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| End bp | 5599607 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641550151 |
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| Product | D-erythrose-4-phosphate dehydrogenase |
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| Protein accession | YP_001671233 |
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| Protein GI | 167036002 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01532] D-erythrose-4-phosphate dehydrogenase
[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.233759 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCACC TGCGTCCCTA CAAAGTTGCA CTCAACGGTT ATGGCCGCAT CGGCCGCTGT
GTCCTGCGCG CGCTGTTCGA GCGGGGGGCA AAGGCCGGTT TCGAGATCGT CGCGCTGAAC
GACCTGGCCG ACCAGGCCAG CTTGGAATAC CTGACCCGCT TCGACTCCAC CCACGGGCGT
TTCCCCGGCG AGGTGAAGGT CGACGGCGAC TGTCTGCATA TCAATGGCGA CTGCGTGAAG
GTGATGCGCA GTGCCACCCC CGAAGGCATC GACTGGGCCG CGCTGGGCAT CGACCTGGTG
CTGGAGTGCT CCGGTGCCTA CAACACCCGT GCCGATGGCC AGCGCTTCCT CGATGCCGGT
GCGCCCCGGG TGCTGTTCTC GCAGCCGATG GCCAGCGAGG CCGACGTTGA CGCCACGGTG
GTCTATGGCA TCAACCAGGC CTGCCTGACC GGCAGCGAGC GCCTGGTGTC CAACGCCTCG
TGCACCACCA ACTGCGGCGT GCCACTGCTG CGGGTGCTGG ACCAGGCGTT CGGCATCGAA
TATGTGCAGA TCACCACCAT CCACTCGGCC ATGAACGACC AGCCGGTGAT CGACGCCTAC
CACCACGAAG ACCTGCGCCG CACGCGCTCG GCCTTCCAGT CGGTGATCCC GGTGTCCACT
GGTCTGGCGC GTGGCATCGA ACGCCTGCTC CCGGAACTTG CCGGGCGAAT CCAGGCCAAA
GCGGTACGGG TACCGACCGT CAACGTCTCG TGCCTGGACA TCACCCTGCA GACCGCCCGC
GACACCAGCG CGGCCGAGGT CAACCGGGTG CTGCGCGAGG CCGCGCTGGA AGGCCCGCTG
AAAGGCCTGC TGGCCTACAC CGAGCTGCCG CACGCCAGCT GTGATTTCAA CCATGACCCG
CATTCGGCGA TCGTCGATGC CAGCCAGACT CGTGTTTCCG GCCCGCGCCT GGTGAACCTG
CTGGCCTGGT TCGACAACGA ATGGGGTTTT GCCAACCGTA TGCTCGACGT TGCAGAACAC
TTTCTGCACG TCGTCCACCC AACCCGCAAC AAACAGCCCT GA
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| Protein sequence | MPHLRPYKVA LNGYGRIGRC VLRALFERGA KAGFEIVALN DLADQASLEY LTRFDSTHGR
FPGEVKVDGD CLHINGDCVK VMRSATPEGI DWAALGIDLV LECSGAYNTR ADGQRFLDAG
APRVLFSQPM ASEADVDATV VYGINQACLT GSERLVSNAS CTTNCGVPLL RVLDQAFGIE
YVQITTIHSA MNDQPVIDAY HHEDLRRTRS AFQSVIPVST GLARGIERLL PELAGRIQAK
AVRVPTVNVS CLDITLQTAR DTSAAEVNRV LREAALEGPL KGLLAYTELP HASCDFNHDP
HSAIVDASQT RVSGPRLVNL LAWFDNEWGF ANRMLDVAEH FLHVVHPTRN KQP
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