Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5010 |
Symbol | |
ID | 5872825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5596726 |
End bp | 5597055 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641550148 |
Product | lipoprotein |
Protein accession | YP_001671230 |
Protein GI | 167035999 |
COG category | [R] General function prediction only |
COG ID | [COG3895] Predicted periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.569821 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCGC TTTTGGCCGT GACGGCCCTG GCGACACTGG CAGGATGCTC ACTGCTGCAG CCGGCGCAAC CCGCCCCGGC AGACAACTGG ACCCGTTGGG TCTGCGACAC CCAGGCCGAA GTGCTGTGGC GCTTCGCCGA TGCACAACGC GACCAGGTCG ACGTGCGCCT TGGCGGCGGT GACCAGGTCT ACCGGCTCAA GTCCGAGCCG GGTGCTTCGG GTGCGCTGTA CAGCGATGGC ATGCTGGCCT TCCACACCAA GGGCGAAGAA GGCCTGGTGT ACTGGGTGGC AACCAACGAT CTGATTGGGC GGGGCTGCAA GGCACCGTGA
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Protein sequence | MKALLAVTAL ATLAGCSLLQ PAQPAPADNW TRWVCDTQAE VLWRFADAQR DQVDVRLGGG DQVYRLKSEP GASGALYSDG MLAFHTKGEE GLVYWVATND LIGRGCKAP
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