Gene PputGB1_5010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5010 
Symbol 
ID5872825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5596726 
End bp5597055 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content66% 
IMG OID641550148 
Productlipoprotein 
Protein accessionYP_001671230 
Protein GI167035999 
COG category[R] General function prediction only 
COG ID[COG3895] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.569821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGC TTTTGGCCGT GACGGCCCTG GCGACACTGG CAGGATGCTC ACTGCTGCAG 
CCGGCGCAAC CCGCCCCGGC AGACAACTGG ACCCGTTGGG TCTGCGACAC CCAGGCCGAA
GTGCTGTGGC GCTTCGCCGA TGCACAACGC GACCAGGTCG ACGTGCGCCT TGGCGGCGGT
GACCAGGTCT ACCGGCTCAA GTCCGAGCCG GGTGCTTCGG GTGCGCTGTA CAGCGATGGC
ATGCTGGCCT TCCACACCAA GGGCGAAGAA GGCCTGGTGT ACTGGGTGGC AACCAACGAT
CTGATTGGGC GGGGCTGCAA GGCACCGTGA
 
Protein sequence
MKALLAVTAL ATLAGCSLLQ PAQPAPADNW TRWVCDTQAE VLWRFADAQR DQVDVRLGGG 
DQVYRLKSEP GASGALYSDG MLAFHTKGEE GLVYWVATND LIGRGCKAP