| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5004 |
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| Symbol | |
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| ID | 5872819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5590958 |
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| End bp | 5591695 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641550142 |
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| Product | amino acid ABC transporter, periplasmic amino acid-binding protein |
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| Protein accession | YP_001671224 |
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| Protein GI | 167035993 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.828614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCCAC TGCTTTGTGT TCTGGGATTA CTGGCAATGA TGCTGGCAAC ACCCGCCCCG
GGTCACGACA GGCTACGCCT GGTGGCCGAC AACTGGCCAC CGTTCACCGA TGCCAACATG
GCGGGTGGCG GCCTGGCGAC CAGCATCGTC ACCACGGCAT TGGCCCGTGC CGGCTACGCC
AGCGGCTATG AAGAAGTGCC GTGGGCGCGG GCGTTGCTGG GGGTTGGTGA AGGGCGCTAC
GACGTGCTGA TCAATGCCTG GTACAACGAC TCACGCGCCA ACATCGGGCA ATTTTCCAAA
GCCTATCTGA GTAACCGCAT TCGCCTGCTG CAGCGCAAGG GCGAAGCGTT CCACTACAAG
CACCAGTCTG ACTTGTACCC CTACAGCATC GCCGTGGTGC GTGATTACGC CTACTCACCA
GAATTCGACG GCGATACTCG CCTGCACAAG GTGCCGGTGC GCAACTTCTC TTCCGCGGTG
CGCATGCTGG CGGCAGGGCG GGTGAACCTG GCGGTGGAGG ACGAGTACGT GGCGCGTTAC
AACCTGCAGC GCGAGCCGCA GGACGTGCGT GATGGGGTGA TGCTGGTGGA GCCGCCGTTG
GGGGAAAACA CCCTGCACAT CCTGGTCAGC CTGAAGCACC CGGAGCATCA GCGAATCGTC
GAGCGTTTCG AGCAGGCGAT TGCGGCGATG AAGGCCGATG GCAGCTATGC CCGGCTGCTG
CGCCAACATG GCTTTTGA
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| Protein sequence | MRPLLCVLGL LAMMLATPAP GHDRLRLVAD NWPPFTDANM AGGGLATSIV TTALARAGYA
SGYEEVPWAR ALLGVGEGRY DVLINAWYND SRANIGQFSK AYLSNRIRLL QRKGEAFHYK
HQSDLYPYSI AVVRDYAYSP EFDGDTRLHK VPVRNFSSAV RMLAAGRVNL AVEDEYVARY
NLQREPQDVR DGVMLVEPPL GENTLHILVS LKHPEHQRIV ERFEQAIAAM KADGSYARLL
RQHGF
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