Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5002 |
Symbol | |
ID | 5872817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5587476 |
End bp | 5588657 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641550140 |
Product | hypothetical protein |
Protein accession | YP_001671222 |
Protein GI | 167035991 |
COG category | [R] General function prediction only |
COG ID | [COG2081] Predicted flavoproteins |
TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.32275 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACTCCA CCGACGTGAT CATCCTCGGC GCCGGCGCCG CCGGCCTGAT GTGCGCCCAG CTCAGCGCCC GCCGTGGCCG CCGGGTACTG CTGCTCGACC ACGCCAACAA GCCAGGCAAG AAGATCCTCA TGTCCGGCGG CGGGCGCTGC AACTTCACCA ACATGTACAC CGAGCCAGCC AACTTCCTGT CGCAGAATGC GCACTTCTGT AAGTCGGCCC TGGCCCGCTA CACCCAGTGG GACTTCATCG AGCTGGTGTG CAAACACGGC GTGGCGTACC ACGAGAAGAA ACTTGGCCAG CTGTTCTGCG ACAACAAGGC CAGCGACATC CTCGACATGC TGCTGGCCGA ATGCGACGAG GCCGGCGCCG AGATCCGCAT GCACACCAGC ATCGAACAGA TCGAGAAGAC CGAAAACGGC TACCTGCTGC AGACCAACGG CGGCCAGTTC GCCTGCCAGT CGCTGGTGAT CGCCACGGGC GGCCTGTCGA TTCCCACCCT GGGCGCCACC GGCTTCGGCT ACCAAGTGGC GCGCCAGTTC GGCCACACGC TGCTGCCGAC CCGCGCCGGG CTGGTGCCGT TCACCATCAC CGAGCCCCAA CTCAAGGCAC TGTGCACCGA GTTGTCCGGC ACCTCACTGG ATTGCACCGC CAGCTGCAAC GGCACCAGCT TCCGCGAGAA CCTGCTGTTC ACCCACCGCG GCCTGAGCGG CCCGGCAATC CTGCAGATCT CGTCGTTCTG GGAAGCCGGC GACACGGTCG AGATCAACCT GCTGCCCGAC CGCGATGCGC TGACCTGGCT GCAGCAAATG CAGGCCGAAC GCGCCAACGC CGAACTGAAG ACCGTGCTGG GCGAAGTGTT CACCCGCAAG CTGGCCAACC TGCTGGCCGA GCAGTGGTTC GAGTCCAAGC CGATGAAGCA GTACACCCCA GCAGAGCTGG CGCAAATCGC CGAAAAGCTG GCGAACTGGC AAGTGGTGCC GGCCGGCACC GAAGGCTATC GCACCGCCGA AGTGACCTTG GGCGGCGTCG ATACCCGCGA AGTGTCGTCC AAGACCATGG AGTCGCTGAA AAGCCCTGGG CTGTACTTCA TCGGCGAAGT GCTGGACGTC ACCGGCCACC TGGGCGGTTT CAACTTCCAG TGGGCCTGGG CATCGGCCAA CGCCGCAGCG CAGTTCGTGT AG
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Protein sequence | MHSTDVIILG AGAAGLMCAQ LSARRGRRVL LLDHANKPGK KILMSGGGRC NFTNMYTEPA NFLSQNAHFC KSALARYTQW DFIELVCKHG VAYHEKKLGQ LFCDNKASDI LDMLLAECDE AGAEIRMHTS IEQIEKTENG YLLQTNGGQF ACQSLVIATG GLSIPTLGAT GFGYQVARQF GHTLLPTRAG LVPFTITEPQ LKALCTELSG TSLDCTASCN GTSFRENLLF THRGLSGPAI LQISSFWEAG DTVEINLLPD RDALTWLQQM QAERANAELK TVLGEVFTRK LANLLAEQWF ESKPMKQYTP AELAQIAEKL ANWQVVPAGT EGYRTAEVTL GGVDTREVSS KTMESLKSPG LYFIGEVLDV TGHLGGFNFQ WAWASANAAA QFV
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