Gene PputGB1_5002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5002 
Symbol 
ID5872817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5587476 
End bp5588657 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content65% 
IMG OID641550140 
Producthypothetical protein 
Protein accessionYP_001671222 
Protein GI167035991 
COG category[R] General function prediction only 
COG ID[COG2081] Predicted flavoproteins 
TIGRFAM ID[TIGR00275] flavoprotein, HI0933 family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.32275 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACTCCA CCGACGTGAT CATCCTCGGC GCCGGCGCCG CCGGCCTGAT GTGCGCCCAG 
CTCAGCGCCC GCCGTGGCCG CCGGGTACTG CTGCTCGACC ACGCCAACAA GCCAGGCAAG
AAGATCCTCA TGTCCGGCGG CGGGCGCTGC AACTTCACCA ACATGTACAC CGAGCCAGCC
AACTTCCTGT CGCAGAATGC GCACTTCTGT AAGTCGGCCC TGGCCCGCTA CACCCAGTGG
GACTTCATCG AGCTGGTGTG CAAACACGGC GTGGCGTACC ACGAGAAGAA ACTTGGCCAG
CTGTTCTGCG ACAACAAGGC CAGCGACATC CTCGACATGC TGCTGGCCGA ATGCGACGAG
GCCGGCGCCG AGATCCGCAT GCACACCAGC ATCGAACAGA TCGAGAAGAC CGAAAACGGC
TACCTGCTGC AGACCAACGG CGGCCAGTTC GCCTGCCAGT CGCTGGTGAT CGCCACGGGC
GGCCTGTCGA TTCCCACCCT GGGCGCCACC GGCTTCGGCT ACCAAGTGGC GCGCCAGTTC
GGCCACACGC TGCTGCCGAC CCGCGCCGGG CTGGTGCCGT TCACCATCAC CGAGCCCCAA
CTCAAGGCAC TGTGCACCGA GTTGTCCGGC ACCTCACTGG ATTGCACCGC CAGCTGCAAC
GGCACCAGCT TCCGCGAGAA CCTGCTGTTC ACCCACCGCG GCCTGAGCGG CCCGGCAATC
CTGCAGATCT CGTCGTTCTG GGAAGCCGGC GACACGGTCG AGATCAACCT GCTGCCCGAC
CGCGATGCGC TGACCTGGCT GCAGCAAATG CAGGCCGAAC GCGCCAACGC CGAACTGAAG
ACCGTGCTGG GCGAAGTGTT CACCCGCAAG CTGGCCAACC TGCTGGCCGA GCAGTGGTTC
GAGTCCAAGC CGATGAAGCA GTACACCCCA GCAGAGCTGG CGCAAATCGC CGAAAAGCTG
GCGAACTGGC AAGTGGTGCC GGCCGGCACC GAAGGCTATC GCACCGCCGA AGTGACCTTG
GGCGGCGTCG ATACCCGCGA AGTGTCGTCC AAGACCATGG AGTCGCTGAA AAGCCCTGGG
CTGTACTTCA TCGGCGAAGT GCTGGACGTC ACCGGCCACC TGGGCGGTTT CAACTTCCAG
TGGGCCTGGG CATCGGCCAA CGCCGCAGCG CAGTTCGTGT AG
 
Protein sequence
MHSTDVIILG AGAAGLMCAQ LSARRGRRVL LLDHANKPGK KILMSGGGRC NFTNMYTEPA 
NFLSQNAHFC KSALARYTQW DFIELVCKHG VAYHEKKLGQ LFCDNKASDI LDMLLAECDE
AGAEIRMHTS IEQIEKTENG YLLQTNGGQF ACQSLVIATG GLSIPTLGAT GFGYQVARQF
GHTLLPTRAG LVPFTITEPQ LKALCTELSG TSLDCTASCN GTSFRENLLF THRGLSGPAI
LQISSFWEAG DTVEINLLPD RDALTWLQQM QAERANAELK TVLGEVFTRK LANLLAEQWF
ESKPMKQYTP AELAQIAEKL ANWQVVPAGT EGYRTAEVTL GGVDTREVSS KTMESLKSPG
LYFIGEVLDV TGHLGGFNFQ WAWASANAAA QFV