| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4999 |
|---|
| Symbol | |
|---|
| ID | 5872814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 5583023 |
|---|
| End bp | 5584342 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641550137 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001671219 |
|---|
| Protein GI | 167035988 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACATG CTTTCGAAAC CCTGGTCGGG GATGTGCGCG CCGCCCTGCA AGCAGGCGAA
CAGTTCACCC TCGGCTACAG CGCCGAACAG TCGCAATTCG TGCGTTTCAA CCACGCCAAG
GTGCGCCAGG CCGGTGAAGT GAGCCAGGCC AGCGCTCAAC TGCGGCTGGT GCACGATGGC
CGCCAGGCGG AACAGCAAGT GACCTTGAGT GGCGAGGTGC AGGTGGACCG CCAGCGCCTG
GCCGATGCTC TGGCGCAATT GCGCCAGACC CTGCCGCTGT TGGCCCTCGA CCCCTACCTG
CGCCTGGACG AAAGCGCCTG GCACAGCCAC AGCCTGCAAG AACAACCACT GCCCGAGCTG
GACGAAGTGC TGGCCTTGCT CGACAGCGAG GCAGGTGACC TGGACCTGGT CGGCATCTAC
GCCGCAGGCC CTATCTGCCG AGGCTTTGCC AGTTCGTTCG GGGCCTTTGG CTGGCACCAG
GCCAACAGTT TCAACTTCGA CTGGAGCCTT TTCCACGAAA ACGGCCAGGC GGTGAAGGCC
AACTATGCCG GCCAGCTGTG GAGCGCAGAC GACTTCATCG CACGCCTGCG CCAGGCACGT
GAACAACTGG GCTTCCTCGG TCGCCCGGCG ATCACCCTCA AACCGGGAAG CTACCGCGCC
TACCTGGCTC CGGCAGCCAT GGACGAGATC GCCGGCATGC TCTGCTGGGG CGGTTTTTCC
GCGCAGGCCC TGGCCACTGG CAACAGCGCC CTGCAGCGCT TGTACAACGG CGATGCACGG
CTGAGCCCGC TGGTGAGTTT CACCGAGCAG GTCAGCGGGT CGCTAAGCCC GGCGTTTTCC
GACGAAGGTG CGCCGCGTCT GGATGTGCCA TTGATCCAGC ACGGTGAGGC GCTGCAACGC
TTGATCAGTG CGCGCAGTGC AGCCGAGTTC GCGTTGCTGG CCAATGGTGC CGACAGTTAC
GAATCGCCGT GTGCGCTGAG CCTGGCGCCG GGTAATCTGG CCAGCGAGCA GGTGCTTGAG
CGGCTGGGCA CCGGGCTGTA CATCAGCAAC CTGTGGTACC TGAACTACTC TGACCTGCCG
GCAGCACGCA TGACCGGGCT GACCCGCTTC GCCACGTTCT GGGTGGAAAA CGGGCAGATC
CAGGGGCCGG TAAGTACCAT GCGCTTCGAT GATAGCCTGT ACAGCTTGCT GGGTAGCCAA
CTGGAGGACC TGACCCGGGA GCGCGAGATG ATCTTGTCGA CCAGTACCTA TGGACAGCGC
AGTACCGGGT CGAGTCATTT GCCCGGGGCA CTGGTCAAAG GCCTGACCCT GACACTGTGA
|
|---|
| Protein sequence | MQHAFETLVG DVRAALQAGE QFTLGYSAEQ SQFVRFNHAK VRQAGEVSQA SAQLRLVHDG
RQAEQQVTLS GEVQVDRQRL ADALAQLRQT LPLLALDPYL RLDESAWHSH SLQEQPLPEL
DEVLALLDSE AGDLDLVGIY AAGPICRGFA SSFGAFGWHQ ANSFNFDWSL FHENGQAVKA
NYAGQLWSAD DFIARLRQAR EQLGFLGRPA ITLKPGSYRA YLAPAAMDEI AGMLCWGGFS
AQALATGNSA LQRLYNGDAR LSPLVSFTEQ VSGSLSPAFS DEGAPRLDVP LIQHGEALQR
LISARSAAEF ALLANGADSY ESPCALSLAP GNLASEQVLE RLGTGLYISN LWYLNYSDLP
AARMTGLTRF ATFWVENGQI QGPVSTMRFD DSLYSLLGSQ LEDLTREREM ILSTSTYGQR
STGSSHLPGA LVKGLTLTL
|
|---|
| |