Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4992 |
Symbol | |
ID | 5872807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5569533 |
End bp | 5570663 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641550130 |
Product | glycosyl transferase group 1 |
Protein accession | YP_001671212 |
Protein GI | 167035981 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCAGCC GCTCTGAACC GCGCATCCTG CAGTTCTGCC ATGGTTATGA CGGGCCTTTC CTCGACTGCG CCCGTCAGTA CGCCAGCCTG TTCCAGGGGC GTGGCTACCA GGTCACCACG GTGTTCCTCA CCGGGGCAGC CGACCCGCAG GTAGCGGCCG GCTGTGCGTC GGACGAGGTG TTGTTCCTGG AGTTCAGCTC CAAGGCCGTG CGCGGTTTGA AGCTCGGGGC GATCCGCGCG TTGCGGCGGA TCGCGGCCGA GCGCAACTTC GCCTTCTGCA TCGCCCACCG CTTCAAGCCC ATCTACGTCG CCCTGCTGGG TACCGGCCTG CCGGTGATTG GCGTGCACCA TGCCTTTGGT GACTATGAGC GCAAGGGCCG CCGGCTGTTC GCCAACCTGT TCAGCAAGCG CCTGAGCCTG CTGGGTGTGT CGGACGCGGT GCGTGACGAC ATGCGTCGGT GCCTGCCACA GTGGCCGGCC GAACGCATCC AGACCCTGTA CAACCGCATC GACATCGACG CCCTGCAAAT GGCCCTGGTG CCGCATGCCG AGGCGCGCCA GGCCCTGGGC CTGGATGCGC AGGCGTGGAT CGTCGGCAAC GTCGGGCGCT TGCACCCGGA CAAGGACCAG GCCACTTTGT TGCGTGGCTT TGCCCAAGCG CTGCCGGGGC TGCCGGCGGG TGCTCGCTTG GCTATCCTCG GCAAGGGCCG CCTGGCGGAC GAACTCAAGG CCTTGGCTGC CGAGCTCGGT ATTGCCGGGC AGGTGGACTT CCTGGGTCAG GTGCCGGATG CGCGGCGTTA CTTCCAGGCC TTCGATGTGT TCGCCCTGAG CTCCGACCAT GAGCCGTTCG GCATGGTCCT GCTCGAAGCC ATGGTCGCCG GCGTGCCGGT GCTGGCCACG GCCTGTGGCG GTGCCCGCGA AGTCGTCGAG GGTGTTGGCG TGCTGTTCCC GTTGGGCGAT GCTGCCCAGC TGGCTCAAGG CCTGAAGCAC ATGGCCACGC TGGACGCCGA GCAGCGCCAG GCTTGTGCCG AGCACATGCT GCAGCGCCTG CGTGAGCGTT TCTCCGACCA GGCAGTGCGC GAGGCCTTCT GGCAGCTGCC GCAGGTGCGT GCGCTGGTGG GGCAGGCCTG A
|
Protein sequence | MTSRSEPRIL QFCHGYDGPF LDCARQYASL FQGRGYQVTT VFLTGAADPQ VAAGCASDEV LFLEFSSKAV RGLKLGAIRA LRRIAAERNF AFCIAHRFKP IYVALLGTGL PVIGVHHAFG DYERKGRRLF ANLFSKRLSL LGVSDAVRDD MRRCLPQWPA ERIQTLYNRI DIDALQMALV PHAEARQALG LDAQAWIVGN VGRLHPDKDQ ATLLRGFAQA LPGLPAGARL AILGKGRLAD ELKALAAELG IAGQVDFLGQ VPDARRYFQA FDVFALSSDH EPFGMVLLEA MVAGVPVLAT ACGGAREVVE GVGVLFPLGD AAQLAQGLKH MATLDAEQRQ ACAEHMLQRL RERFSDQAVR EAFWQLPQVR ALVGQA
|
| |