Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4979 |
Symbol | |
ID | 5872794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5555556 |
End bp | 5555888 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641550117 |
Product | small multidrug resistance protein |
Protein accession | YP_001671199 |
Protein GI | 167035968 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2076] Membrane transporters of cations and cationic drugs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.174415 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCCT ACACCTACCT CGCCATTGCC ATCTGCGCAG AAGTCATCGC CACCGCTTCG ATGAAAGCGG TGAAGGGCCT GAGCACGCCG TTGCCACTGC TGCTGATGGT GGTGGGGTAT GGCGTTGCCT TCTGGATGCT GACCTTGGTG GTGCGCAGCA TTCCTGTAGG GATTGCCTAT GCCATCTGGT CGGGGCTGGG GATTGTGCTG ATCAGTGTGG CGGCATTGGT GATCTACGGG CAGAAGCTCG ATGTGCCGGC GATGCTGGGC ATGGCCATGA TTGTGGGGGG CGTGGTGGTG ATACAGCTGT TTTCGAAAGC GGCTGGGCAC TGA
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Protein sequence | MNAYTYLAIA ICAEVIATAS MKAVKGLSTP LPLLLMVVGY GVAFWMLTLV VRSIPVGIAY AIWSGLGIVL ISVAALVIYG QKLDVPAMLG MAMIVGGVVV IQLFSKAAGH
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