Gene PputGB1_4979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4979 
Symbol 
ID5872794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5555556 
End bp5555888 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content59% 
IMG OID641550117 
Productsmall multidrug resistance protein 
Protein accessionYP_001671199 
Protein GI167035968 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.174415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCCT ACACCTACCT CGCCATTGCC ATCTGCGCAG AAGTCATCGC CACCGCTTCG 
ATGAAAGCGG TGAAGGGCCT GAGCACGCCG TTGCCACTGC TGCTGATGGT GGTGGGGTAT
GGCGTTGCCT TCTGGATGCT GACCTTGGTG GTGCGCAGCA TTCCTGTAGG GATTGCCTAT
GCCATCTGGT CGGGGCTGGG GATTGTGCTG ATCAGTGTGG CGGCATTGGT GATCTACGGG
CAGAAGCTCG ATGTGCCGGC GATGCTGGGC ATGGCCATGA TTGTGGGGGG CGTGGTGGTG
ATACAGCTGT TTTCGAAAGC GGCTGGGCAC TGA
 
Protein sequence
MNAYTYLAIA ICAEVIATAS MKAVKGLSTP LPLLLMVVGY GVAFWMLTLV VRSIPVGIAY 
AIWSGLGIVL ISVAALVIYG QKLDVPAMLG MAMIVGGVVV IQLFSKAAGH