| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4975 |
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| Symbol | |
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| ID | 5872790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5549465 |
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| End bp | 5551345 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641550113 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_001671195 |
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| Protein GI | 167035964 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAAC AAGAAAAAGC GATCAACCTC AGCGAATCGG CACAAGTCGA TCAGCAGTCC
GTGCAACCGT TCCCGCGTTC GCGCAAGGTC TATGTCGAAG GCTCGCGCCC GGACATCCGT
GTACCCATGC GTGAAATCAG CCTGGATGAC ACCCCTACCG ATTTTGGTGG CGAGACCAAT
GCCCCGGTGC TGGTGTACGA CACCTCCGGC CCATACACCG ACCCCAACGT GATCATCGAC
GTGCGCAAAG GCCTGGCCGA CGTGCGTTCA GCGTGGATCG ACGCCCGTGG TGACACCGAG
CGCCTGGACG GCCTGAGCTC CGACTTCGGC CAGCAGCGCC TGAACGACGC CGAGCTGGCC
AAGCTGCGTT TCGCCCATGT GCGCAACCCG CGTCGTGCCA AGGCGGGTGC CAACGTCTCG
CAGATGCACT ATGCCCGCCG GGGCATCATC ACCGCCGAGA TGGAATACGT GGCCATCCGC
GAAAACATGA AGCTGCAGGA GGCCCGCGCA GCTGGCCTGC TCAAAGAGCA GCATGCTGGC
CACAGCTTCG GTGCCAACAT CCCGAAAGAA ATCACCCCCG AATTCGTCCG CCAGGAAATC
GCCCGTGGCC GCGCGATCAT TCCGGCCAAC ATCAACCACC CGGAAGTTGA GCCGATGATC
ATCGGCCGCA ATTTCCTGGT GAAGATCAAC GGCAACATCG GCAACAGCGC CTTGGGGTCC
TCGATCGAGG AAGAAGTGGC CAAGCTGACC TGGGGCATCC GCTGGGGCTC GGACACGGTC
ATGGACCTGT CCACCGGCAA GCACATTCAC GAAACCCGCG AGTGGATCAT CCGCAACTCG
CCGGTGCCGA TCGGCACCGT GCCGATCTAT CAGGCCCTGG AAAAGGTCAA CGGCGTGGCC
GAGGACCTGA TCTGGGAGCT GTTCCGCGAC ACACTGATCG AGCAGGCCGA GCAGGGGGTG
GACTACTTCA CTATCCACGC CGGTGTGCTG CTGCGTTATG TGCCGCTGAC CGCCAAGCGT
GTCACCGGTA TCGTCAGCCG TGGGGGCTCG ATCATGGCCA AGTGGTGCCT GGCGCATCAC
AAGGAAAACT TCCTGTACAC CCACTTCGAC GAAATCTGCG AAATCATGAA GGCCTACGAC
GTCAGCTTCT CGCTGGGCGA CGGCCTGCGC CCTGGCTCGA TTGCCGACGC CAACGACGCC
GCGCAGTTCG GTGAGCTGGA AACCCTCGGC GAACTGACCA AGATTGCCTG GAAGCACGAC
GTGCAATGCA TGATCGAAGG CCCTGGCCAC GTGCCGATGC AGTTGATCAA AGAGAACATG
GACAAGCAGC TGGAGTGCTG CGACGAAGCG CCGTTCTACA CCCTCGGCCC ACTGACCACC
GACATTGCTC CGGGCTACGA CCACATCACT TCGGGTATTG GTGCGGCGAT GATCGGCTGG
TTCGGTTGCG CCATGCTGTG CTACGTCACG CCCAAGGAAC ATTTGGGCCT GCCGAACAAA
GACGACGTCA AGACCGGCAT CATCACCTAC AAGATCGCCG CGCATGCCGC CGACCTTGCC
AAGGGCCACC CAGGTGCGCA GATTCGCGAC AACGCCCTGT CGAAGGCGCG TTTCGAGTTC
CGTTGGGAAG ACCAGTTCAA CCTTGGCCTT GACCCGGACA CGGCCCGTGC CTTCCACGAC
GAGACGCTGC CGAAGGAATC GGCCAAGGTC GCGCACTTCT GCTCGATGTG CGGGCCGAAG
TTCTGCTCGA TGAAGATCAC CCAGGAAGTG CGTGAGTACG CCGCCAAGAT CGAGGCCGTG
GATGTGACGG TCGAAGAAGG CATGCGTGAG CAGGCCGAGC GGTTCCGCCA GGAAGGCAGC
CAGCTGTACC ACAAAGTGTA A
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| Protein sequence | MTKQEKAINL SESAQVDQQS VQPFPRSRKV YVEGSRPDIR VPMREISLDD TPTDFGGETN
APVLVYDTSG PYTDPNVIID VRKGLADVRS AWIDARGDTE RLDGLSSDFG QQRLNDAELA
KLRFAHVRNP RRAKAGANVS QMHYARRGII TAEMEYVAIR ENMKLQEARA AGLLKEQHAG
HSFGANIPKE ITPEFVRQEI ARGRAIIPAN INHPEVEPMI IGRNFLVKIN GNIGNSALGS
SIEEEVAKLT WGIRWGSDTV MDLSTGKHIH ETREWIIRNS PVPIGTVPIY QALEKVNGVA
EDLIWELFRD TLIEQAEQGV DYFTIHAGVL LRYVPLTAKR VTGIVSRGGS IMAKWCLAHH
KENFLYTHFD EICEIMKAYD VSFSLGDGLR PGSIADANDA AQFGELETLG ELTKIAWKHD
VQCMIEGPGH VPMQLIKENM DKQLECCDEA PFYTLGPLTT DIAPGYDHIT SGIGAAMIGW
FGCAMLCYVT PKEHLGLPNK DDVKTGIITY KIAAHAADLA KGHPGAQIRD NALSKARFEF
RWEDQFNLGL DPDTARAFHD ETLPKESAKV AHFCSMCGPK FCSMKITQEV REYAAKIEAV
DVTVEEGMRE QAERFRQEGS QLYHKV
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