Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4974 |
Symbol | |
ID | 5872789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5548016 |
End bp | 5549299 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641550112 |
Product | hydroxymethylpyrimidine transporter CytX |
Protein accession | YP_001671194 |
Protein GI | 167035963 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1457] Purine-cytosine permease and related proteins |
TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family [TIGR02358] probable hydroxymethylpyrimidine transporter CytX |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCAC CCAGCCAATT CTCCCCCGAC CACCCGGTCC CCACCCACCA GCGTATCTTC GGTGCCCGCG ACCTGTTTTC GCTGTGGTTC TCCCTAGGCA TCGGCCTGAT GGTGCTGCAA GTCGGTGCCA TGCTGGCGCC AGGCCTGGGC CTTGCCGGCG CGGTGCTGGC CATCGCCCTG GGCACCGGTG TCGGTGTGCT GTTGCTGGGC GCCGCCGGGG TGATCGGCAG CGACACCGGC CTGTCCGCCA TGGGCACGTT GAAACTCAGC CTGGGCAGCC ATGGCGCGCG TTTGCCGGCG TTGCTCAACC TGCTGCAACT GGTGGGCTGG GGCGCGTTCG AAATCATCGT CATGCGCGAT GCTGCCAGCC TGTTGGGCGC GCGAGCCTTC GGTGAGGAGA GTGCCTGGAA CAGCCCGATG CTGTGGACCC TGTGTTTCGG TGCGCTAGCC ACCTTGCTGG CCGTCAGCGG GCCACTGGCC TTCGTGCGCA AGGTGCTGCG CGCCTGGGGG ATCTGGTTGC TGCTGGGCGC TTGCGTCTGG CTCACCTGGA ACCTGTTCGC CAAGGCCGAC CTGGCTGATC TGTGGAGCCG CGCGGGTGAC GGTTCGATGT CCCTGGCGGT GGGCTTTGAT ATCGTCATCG CCATGCCGCT GTCCTGGTTG CCACTGATTG CCGACTACTC GCGTTTCGCC CGCAACGGCA AGCATGTGTT CGGTGGCACG GTCGTGGGCT ATTTCATCGG CAACACCTGG CTGATGAGCC TGGGCGTGGC CTACACCCTG GCTTTCGCCG CCAGTGGCGA AGTCAATGCG CTGCTGCTGG CGCTGGCGGG GGCCGGCATG GGTATCCCGT TGCTGCTGAT TCTGCTGGAT GAGTCGGAAA AAGCCTTCGC CGACATCCAC TCGGCGGCAG TTTCAACCGG TGTGCTGCTG CCGCTGAAGG TCGAGCACCT GGCACTTGCG ATCGGCGTGC TGTGCACCTT GATCGCCCTG CTGGCCCCCT TGGCCCAGTA TGAGAACTTC CTGTTGCTGA TCGGTTCGGT ATTCGCGCCG CTGTTCGGTG TGGTGCTGAT GGACCATTAC GTGATCCGTC GTCGTCGCCT GCCTGCGCAA ATCGATGGCT TGCACTGGCA AGCGCTGGTG GCCTGGTTTG CGGGTGTGGC GGCCTATCAC CTGATTGCCG CTAATGCACC GGAACTGGGC GCTACCCTGC CAGCATTGCT GCTGGCAGGT GTGCTGCATG GGCTGCTAAG CCTCAGCCGC GGCCGGGAAA CAGCTCAGGC TTGA
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Protein sequence | MTSPSQFSPD HPVPTHQRIF GARDLFSLWF SLGIGLMVLQ VGAMLAPGLG LAGAVLAIAL GTGVGVLLLG AAGVIGSDTG LSAMGTLKLS LGSHGARLPA LLNLLQLVGW GAFEIIVMRD AASLLGARAF GEESAWNSPM LWTLCFGALA TLLAVSGPLA FVRKVLRAWG IWLLLGACVW LTWNLFAKAD LADLWSRAGD GSMSLAVGFD IVIAMPLSWL PLIADYSRFA RNGKHVFGGT VVGYFIGNTW LMSLGVAYTL AFAASGEVNA LLLALAGAGM GIPLLLILLD ESEKAFADIH SAAVSTGVLL PLKVEHLALA IGVLCTLIAL LAPLAQYENF LLLIGSVFAP LFGVVLMDHY VIRRRRLPAQ IDGLHWQALV AWFAGVAAYH LIAANAPELG ATLPALLLAG VLHGLLSLSR GRETAQA
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