| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4968 |
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| Symbol | |
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| ID | 5872783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5542511 |
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| End bp | 5544415 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641550106 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_001671188 |
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| Protein GI | 167035957 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.713463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAATC CCAGCGCTAG CGCCTATAAC GCAGACGCCA TCGAAGTCCT CTCGGGCCTT
GACCCGGTCC GCAAGCGGCC GGGCATGTAC ACCGATACCA GCCGCCCCAA CCACCTGGCC
CAGGAAGTCA TCGACAACAG TGTCGACGAA GCCCTGGCCG GCCACGCGCG TTCGGTGCAG
GTCATCCTGC ATGCCGACCA CTCGCTGGAA GTCAGCGACG ACGGCCGTGG CATGCCGGTG
GACATCCACC CGGAAGAGGG CGTGTCCGGG GTCGAGCTGA TCCTCACCAA GCTGCACGCT
GGCGGCAAGT TCTCCAACAA GAACTACCAG TTTTCTGGCG GCCTGCATGG TGTGGGCATT
TCGGTGGTCA ACGCCCTGTC GACCCAGGTG CGCGTGCGTG TCAAACGTGA CGGCAACGAA
TACCAGATGA CGTTCGCCGA CGGCTTCAAG GCCAGCGAGC TGGAAGTGGT CGGCTCGGTC
GGCAAGCGCA ACACCGGCAC CAGCGTGTAC TTCAGCCCCG ACCCCAAGTA CTTCGACTCG
GCCAAGTTTT CCATCAGCCG CCTCAAGCAC GTGCTCAAGG CCAAGGCAGT ACTGTGCCCG
GGCCTGCTGG TCACCTTCGA GGACAAGGCC AGCGGCGAGA AAGTCGAGTG GCATTATGAA
GATGGCCTGC GTTCTTACCT GGTCGATTCG GTCAGCGAAT TCCTGCGTCT GCCCGACGAG
CCGTTCTGCG GCAGCCTGGC TGGCAACAAG GAAGCCGTGG ACTGGGCGTT GCTGTGGTTG
CCAGAAGGTG GCGACAGCAT CCAGGAAAGC TACGTCAACC TGATCCCCAC CGCTCAGGGC
GGCACCCATG TCAACGGCTT GCGTCAGGGC CTGCTGGATG CCATGCGTGA GTTCTGCGAG
TTCCGCAATT TGCTGCCGCG TGGCGTGAAG CTTGCGCCAG AGGACATCTG GGAGCGCATT
TCTTTCGTGC TCTCGATGAA AATGCAGGAG CCGCAGTTCT CTGGGCAGAC CAAAGAGCGC
CTGTCATCGC GCGAGGCGGC CGCGTTCGTT TCCGGCGTGG TCAAGGACGC CTTCAGCCTT
TGGCTCAACG CCCACCCCGA GCTGGGCATG CAACTGGCAG AGCTGGCCAT CAGCAACGCC
GGGCGCCGCC TTAAGGCCAG TAAAAAGGTC GAACGCAAGC GCATCACCCA GGGCCCGGCA
CTGCCTGGCA AGCTGGCCGA TTGCGCCGGC CAGGACCCGA TGCGTGCCGA ACTGTTCCTG
GTCGAGGGTG ACTCGGCAGG TGGCTCGGCC AAGCAGGCGC GGGACAAGGA GTTCCAGGCC
ATCCTGCCGC TGCGCGGCAA GATCCTCAAC ACCTGGGAAG TGGACGGTGG CGAAGTCCTG
GCCAGCCAGG AAGTGCATAA CATTGCCGTG GCCATCGGCG TAGATCCGGG TGCCACCGAC
CTTGCGCAGC TGCGCTACGG CAAGATCTGC ATCCTCGCCG ACGCCGACTC CGACGGGCTG
CACATCGCCA CGCTGCTGTG CGCGCTGTTC GTCCAGCACT TCCGTGCGCT GGTCGAGGCC
GGGCATGTGT ACGTGGCCAT GCCGCCGCTG TACCGCATCG ACCTTGGCAA GGAAATCTAC
TACGCCCTCG ACGAAGCCGA GCGTGACGGC ATTCTCGACC GCCTGGTGGC CGAGAAGAAG
CGCGGCAAGC CGCAGGTCAC CCGCTTCAAG GGCCTGGGCG AGATGAACCC GCCACAGCTG
CGCGAAACCA CCATGGACCC GAACACCCGG CGCCTGGTGC AGTTGACCCT GGATGACGTG
GAGGCCACCT GCGAGCTGAT GGACAAGCTG TTGGCCAAGA AGCGCGCCGG TGACCGCAAG
AGTTGGCTGG AAACCAAAGG CAACCTGGCC GAGGTCATGG TTTGA
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| Protein sequence | MANPSASAYN ADAIEVLSGL DPVRKRPGMY TDTSRPNHLA QEVIDNSVDE ALAGHARSVQ
VILHADHSLE VSDDGRGMPV DIHPEEGVSG VELILTKLHA GGKFSNKNYQ FSGGLHGVGI
SVVNALSTQV RVRVKRDGNE YQMTFADGFK ASELEVVGSV GKRNTGTSVY FSPDPKYFDS
AKFSISRLKH VLKAKAVLCP GLLVTFEDKA SGEKVEWHYE DGLRSYLVDS VSEFLRLPDE
PFCGSLAGNK EAVDWALLWL PEGGDSIQES YVNLIPTAQG GTHVNGLRQG LLDAMREFCE
FRNLLPRGVK LAPEDIWERI SFVLSMKMQE PQFSGQTKER LSSREAAAFV SGVVKDAFSL
WLNAHPELGM QLAELAISNA GRRLKASKKV ERKRITQGPA LPGKLADCAG QDPMRAELFL
VEGDSAGGSA KQARDKEFQA ILPLRGKILN TWEVDGGEVL ASQEVHNIAV AIGVDPGATD
LAQLRYGKIC ILADADSDGL HIATLLCALF VQHFRALVEA GHVYVAMPPL YRIDLGKEIY
YALDEAERDG ILDRLVAEKK RGKPQVTRFK GLGEMNPPQL RETTMDPNTR RLVQLTLDDV
EATCELMDKL LAKKRAGDRK SWLETKGNLA EVMV
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