| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4965 |
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| Symbol | |
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| ID | 5872780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5538744 |
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| End bp | 5541002 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641550103 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_001671185 |
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| Protein GI | 167035954 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.414815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.944414 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACT CACTGGAACT CAGCCTGGAC GGTGTCGAAC GCCGCTCGCT GGCTGACTTC
ACCGAACAGG CCTACCTCAA CTACTCCATG TACGTGATCA TGGACCGCGC CTTGCCGCAC
ATCGGCGACG GCCTGAAGCC GGTGCAGCGA CGCATCGTCT ACGCCATGAG CGAGTTGGGG
CTCGATGCCG ATTCCAAGCA CAAGAAGTCG GCGCGTACCG TCGGTGACGT GCTCGGCAAG
TTCCATCCCC ACGGCGACTC GGCCTGCTAC GAGGCCATGG TGCTGATGGC GCAGCCGTTC
AGCTACCGCT ATACCCTGGT CGATGGCCAG GGCAACTGGG GTGCGCCGGA CGATCCGAAG
TCATTCGCCG CCATGCGTTA CACCGAAGCG CGGTTGTCGC GCTACGCCGA AGTGCTGCTT
AGCGAAGTCG GCCAGGGCAC CGTGGACTGG GTGCCGAACT TCGACGGCAC CTTGCAGGAG
CCGGCCGTGT TACCGGCGCG CCTGCCCAAT ATCCTGCTCA ATGGCACCAC CGGTATCGCC
GTGGGCATGG CCACCGACGT GCCGCCGCAC AACCTGCGTG AAGTAGCCAG CGCGTGCGTG
CGCCTGCTCG ACGAGCCCAA GGCCACCATC GAGCAGCTGT GCGAGCATAT CCAGGGGCCG
GATTACCCGA CCGAGGCCGA AATCGTCACG CCACGGGCCG AAATCCTCAA AATGTACGAA
AGTGGCCGTG GCTCGATCCG CATGCGCGCC GTGTACCGCG TCGAGGATGG CGACGTCGTT
GTCACCGCGC TGCCGCACCA GGTCTCCGGG GCCAAGGTGC TGGAGCAGAT CGCCGCACAG
ATGCAGGCCA AGAAGCTGCC GATGGTCGCC GACCTGCGCG ACGAGTCGGA CCACGAAAAC
CCGTGCCGTA TCGTCATCAT CCCTCGGTCC AATCGCGTGG ATGCCGACGA GCTGATGCAG
CACCTGTTTG CCACCACCGA CCTGGAGAGC ACCTACCGGG TCAACGTGAA TATCATCGGC
CTCGACGGCC GGCCGCAGTT GAAAAACCTG CGAACCATCC TGGTGGAGTG GCTGGAGTTC
CGTACCAATA CCGTTCGTCG CCGCTTGCAG CACCGTCTGG ATAAGGTCGA GAAGCGCTTG
CACCTGTTGG ACGGTTTGCT CACCGCGTTC CTCAACCTGG ATGAAGTGAT CCACATCATC
CGTACCGAGG AGCACCCCAA GCAGGCGTTG ATCGCCCGCT TCGAACTCAC CGAAATCCAG
GCCGACTACA TCCTCGAGAC CCGCCTGCGG CAGTTGGCGC GCCTGGAAGA AATGAAGATC
CGCGGCGAAC AGGACGAGTT GCTGAAGGAG CAAGCCAAGC TGCAGGCCCT GCTGGGCAGC
GAGGCCAAAC TGCGCAAGTT GGTGCGCAGC GAGCTGATCA AGGATGCCGA AACCTATGGC
GACGATCGCC GTTCGCCAAT TGTCGAGCGC GCCGAAGCCA AGGCCCTGTC GGAAAACGAG
CTGATGCCGA CCGAGCCGGT CACCGTGGTG CTCTCCGAGA AGGGCTGGGT GCGCTGCGCC
AAGGGCCATG ACATCGACGC CACCGGCCTT TCCTACAAGG CTGGCGACGG CTTCAAGGCC
GCTGCGGCCG GGCGCTCCAA CCAGTTTGCC GTGCTGATCG ATTCCACCGG GCGCAGCTAC
TCGCTGCCCG CCCACAGCCT GCCATCGGCG CGTGGCCAGG GCGAGCCGCT GACAGGCCGC
CTGACACCGC CACCGGGGGC CACTTTCGAA TGCGTACTGC TGCCTGATGA CGATGCGCTG
TACGTGGTGG CTTCGGATGC CGGCTACGGC TTCGTGGTCA AAGGTGAAGA CCTGCAGGCC
AAGAACAAGG CCGGCAAAGG TTTGCTCAGC CTGCCCAACG GCGCCAAGGT CATGACCCCA
CGCCCGGTGG CGGACCGCGA GCAGGACTGG CTGGCGGCGG TGACCACCGA AGGTCGCCTG
TTGGTGTTCA AGGTCAGCGA CCTGCCACAG CTGGGTAAAG GCAAGGGCAA CAAGATCATT
GGCGTGCCCG GCGACCGGGT GGCCAGCCGT GAAGAATTTG TCACCGATCT GGCCGTGATT
CCTGAAGGTG CAACCCTTGT ATTGCAGGCC GGCAAGCGTA CCCTGTCTTT GAAAGGGGAC
GATCTGGAGC ATTACAAGGG CGAGCGTGGG CGGCGCGGCA GCAAGCTGCC ACGCGGGTTC
CAGCGCGTCG ATGGGTTGCA GGTGGAAGTG CCGGCGTAA
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| Protein sequence | MSDSLELSLD GVERRSLADF TEQAYLNYSM YVIMDRALPH IGDGLKPVQR RIVYAMSELG
LDADSKHKKS ARTVGDVLGK FHPHGDSACY EAMVLMAQPF SYRYTLVDGQ GNWGAPDDPK
SFAAMRYTEA RLSRYAEVLL SEVGQGTVDW VPNFDGTLQE PAVLPARLPN ILLNGTTGIA
VGMATDVPPH NLREVASACV RLLDEPKATI EQLCEHIQGP DYPTEAEIVT PRAEILKMYE
SGRGSIRMRA VYRVEDGDVV VTALPHQVSG AKVLEQIAAQ MQAKKLPMVA DLRDESDHEN
PCRIVIIPRS NRVDADELMQ HLFATTDLES TYRVNVNIIG LDGRPQLKNL RTILVEWLEF
RTNTVRRRLQ HRLDKVEKRL HLLDGLLTAF LNLDEVIHII RTEEHPKQAL IARFELTEIQ
ADYILETRLR QLARLEEMKI RGEQDELLKE QAKLQALLGS EAKLRKLVRS ELIKDAETYG
DDRRSPIVER AEAKALSENE LMPTEPVTVV LSEKGWVRCA KGHDIDATGL SYKAGDGFKA
AAAGRSNQFA VLIDSTGRSY SLPAHSLPSA RGQGEPLTGR LTPPPGATFE CVLLPDDDAL
YVVASDAGYG FVVKGEDLQA KNKAGKGLLS LPNGAKVMTP RPVADREQDW LAAVTTEGRL
LVFKVSDLPQ LGKGKGNKII GVPGDRVASR EEFVTDLAVI PEGATLVLQA GKRTLSLKGD
DLEHYKGERG RRGSKLPRGF QRVDGLQVEV PA
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