Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4962 |
Symbol | |
ID | 5872777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5534973 |
End bp | 5536187 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641550100 |
Product | phosphoserine phosphatase SerB |
Protein accession | YP_001671182 |
Protein GI | 167035951 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0560] Phosphoserine phosphatase |
TIGRFAM ID | [TIGR00338] phosphoserine phosphatase SerB [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.414119 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCGAAA TCGTCCTGAT CAACATCACC GGTGAGGACC GTCCCGGTCT CACTGCGGCT ATCACCGGCG TCCTGCTGCA GGGCGGTGTG AGTATCCTCG ACATCGGCCT GGCGGTCATG CACGGCACCT TGTCGTTTGG CATCCTGGTC GATATCCCGG ACAACGAAGT GGCGACTGCC CTGCTGCAAA GCGTGCAGGC CAAGGCCCAC GAGCTGAACC TGCAGGCCCG CTACACCCCT ATTTCCGAGG CGGATTACCA GCACTGGGCC GATGGCCATG GCGAAGCGCG CCACATCGTT ACGCTGCTCA GCCGCAAGAT CACCCCCGAG CAGTTGCAGC GGGTGAGTGC GGTGATCAGC CAGTACGGCC TGACCATCGA GCGCATCGAG CGCCTGTCGG CCCGTGTGGC GCTGGATGCC GAAACCGACA AGGGCAAGGC AGCCGTCGAG ATTTCCGTGC GCGGCGTACC GAGCGATGCC CAGGCCCTGC GTGCCGATTT CTTTGCCTTG GCTGAAGCGC TGAGCATCGA CATCGCCTTC CAGAAAGACG ACCTGTTCCG CCGCAACCGC CGCCTGGCGG TGTTCGACAT GGATTCCACG CTGATTGAGG CTGAAGTCAT CGACGAGCTG GCCAAGGCGG CCGGTGTGGG CGAGCAGGTC GCGGCGATCA CCGAGCGTGC CATGCGCGGG GAGCTGGATT TCCGCGCCAG TTTCAAGGAG CGCATGGCGC TGCTCAAGGG CCTGGATGTG GGGGTGCTGG ACGAAATCGG TGCCTCGCTG CGCCTGACCG AGGGTGCCGA AAACCTGTTC GCCGAGCTCA AGCGCCTGGG TTACAAGACT GCGATCCTGT CCGGTGGCTT TACCTACTTC GCCCGCCAGG TGCAGGCGCG CCTGGGTATC GACTATGTGT TCGCCAACGA GCTGGAAGTG GTCGATGGCA AGGTGACCGG GGTGGCGGTA GAGCCGATCG TCGACGCCCA GCGCAAAGCC GAGCTGTTGC AAAAGCTGGC CAACGAAGAA GGCTTGCAGC TGGAGCAGAC CATTGCCGTG GGGGATGGTG CCAACGACCT GCCGATGCTG TCGCTGGCTG GGCTGGGTGT CGCGTTCCGT GCCAAGCCGC TGGTGCGCCA ATCGGCCAAG CAGGCTATTT CTACCCTGGG GTTGGATGGC GTGCTGTACC TGCTGGGCCT ACGCGACCGC GACGCGCGCG GCTAG
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Protein sequence | MREIVLINIT GEDRPGLTAA ITGVLLQGGV SILDIGLAVM HGTLSFGILV DIPDNEVATA LLQSVQAKAH ELNLQARYTP ISEADYQHWA DGHGEARHIV TLLSRKITPE QLQRVSAVIS QYGLTIERIE RLSARVALDA ETDKGKAAVE ISVRGVPSDA QALRADFFAL AEALSIDIAF QKDDLFRRNR RLAVFDMDST LIEAEVIDEL AKAAGVGEQV AAITERAMRG ELDFRASFKE RMALLKGLDV GVLDEIGASL RLTEGAENLF AELKRLGYKT AILSGGFTYF ARQVQARLGI DYVFANELEV VDGKVTGVAV EPIVDAQRKA ELLQKLANEE GLQLEQTIAV GDGANDLPML SLAGLGVAFR AKPLVRQSAK QAISTLGLDG VLYLLGLRDR DARG
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