Gene PputGB1_4962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4962 
Symbol 
ID5872777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5534973 
End bp5536187 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content64% 
IMG OID641550100 
Productphosphoserine phosphatase SerB 
Protein accessionYP_001671182 
Protein GI167035951 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR00338] phosphoserine phosphatase SerB
[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.414119 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGAAA TCGTCCTGAT CAACATCACC GGTGAGGACC GTCCCGGTCT CACTGCGGCT 
ATCACCGGCG TCCTGCTGCA GGGCGGTGTG AGTATCCTCG ACATCGGCCT GGCGGTCATG
CACGGCACCT TGTCGTTTGG CATCCTGGTC GATATCCCGG ACAACGAAGT GGCGACTGCC
CTGCTGCAAA GCGTGCAGGC CAAGGCCCAC GAGCTGAACC TGCAGGCCCG CTACACCCCT
ATTTCCGAGG CGGATTACCA GCACTGGGCC GATGGCCATG GCGAAGCGCG CCACATCGTT
ACGCTGCTCA GCCGCAAGAT CACCCCCGAG CAGTTGCAGC GGGTGAGTGC GGTGATCAGC
CAGTACGGCC TGACCATCGA GCGCATCGAG CGCCTGTCGG CCCGTGTGGC GCTGGATGCC
GAAACCGACA AGGGCAAGGC AGCCGTCGAG ATTTCCGTGC GCGGCGTACC GAGCGATGCC
CAGGCCCTGC GTGCCGATTT CTTTGCCTTG GCTGAAGCGC TGAGCATCGA CATCGCCTTC
CAGAAAGACG ACCTGTTCCG CCGCAACCGC CGCCTGGCGG TGTTCGACAT GGATTCCACG
CTGATTGAGG CTGAAGTCAT CGACGAGCTG GCCAAGGCGG CCGGTGTGGG CGAGCAGGTC
GCGGCGATCA CCGAGCGTGC CATGCGCGGG GAGCTGGATT TCCGCGCCAG TTTCAAGGAG
CGCATGGCGC TGCTCAAGGG CCTGGATGTG GGGGTGCTGG ACGAAATCGG TGCCTCGCTG
CGCCTGACCG AGGGTGCCGA AAACCTGTTC GCCGAGCTCA AGCGCCTGGG TTACAAGACT
GCGATCCTGT CCGGTGGCTT TACCTACTTC GCCCGCCAGG TGCAGGCGCG CCTGGGTATC
GACTATGTGT TCGCCAACGA GCTGGAAGTG GTCGATGGCA AGGTGACCGG GGTGGCGGTA
GAGCCGATCG TCGACGCCCA GCGCAAAGCC GAGCTGTTGC AAAAGCTGGC CAACGAAGAA
GGCTTGCAGC TGGAGCAGAC CATTGCCGTG GGGGATGGTG CCAACGACCT GCCGATGCTG
TCGCTGGCTG GGCTGGGTGT CGCGTTCCGT GCCAAGCCGC TGGTGCGCCA ATCGGCCAAG
CAGGCTATTT CTACCCTGGG GTTGGATGGC GTGCTGTACC TGCTGGGCCT ACGCGACCGC
GACGCGCGCG GCTAG
 
Protein sequence
MREIVLINIT GEDRPGLTAA ITGVLLQGGV SILDIGLAVM HGTLSFGILV DIPDNEVATA 
LLQSVQAKAH ELNLQARYTP ISEADYQHWA DGHGEARHIV TLLSRKITPE QLQRVSAVIS
QYGLTIERIE RLSARVALDA ETDKGKAAVE ISVRGVPSDA QALRADFFAL AEALSIDIAF
QKDDLFRRNR RLAVFDMDST LIEAEVIDEL AKAAGVGEQV AAITERAMRG ELDFRASFKE
RMALLKGLDV GVLDEIGASL RLTEGAENLF AELKRLGYKT AILSGGFTYF ARQVQARLGI
DYVFANELEV VDGKVTGVAV EPIVDAQRKA ELLQKLANEE GLQLEQTIAV GDGANDLPML
SLAGLGVAFR AKPLVRQSAK QAISTLGLDG VLYLLGLRDR DARG