| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4961 |
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| Symbol | psd |
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| ID | 5872776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5534001 |
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| End bp | 5534864 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641550099 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_001671181 |
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| Protein GI | 167035950 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.989114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.392503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCC GTTTGTTCAT CATCAGCCAG TACCTGCTGC CGCACCACCT GCTGTCGCGA
CTGGCCGGCT GCGTCGCCGA GTGCCGCGCA CGCTGGTTCA AAAATGCCTT CACTGCCTGG
TTCGCCAAGC GCTATCAGGT CAACATGAGC GAAGCGCTGG TCGAAGACCT GAGCGCGTAC
GAGCATTTCA ACGCGTTCTT CACCCGCGCC CTGAAGCCAG GCGCCCGCCC GCTGGACGAA
ACCCCGGGCG CCATCCTGTG CCCGGCCGAC GGTGCTGTCA GCCAGCTCGG CCCGATCGAG
CACGGCCGCA TCTTCCAGGC CAAAGGCCAC GGTTTCAGCG CGCAAGAGCT GCTGGGCGGT
GACCCGGCCA TGGCCGCGCC GTTCATGGGC GGCGAGTTCG CCACCATTTA CCTGTCGCCC
AAGGACTACC ACCGCGTGCA CATGCCGCTG GCCGGCACCC TGCGTGAAAT GGTCTATGTG
CCGGGCCGCC TGTTCTCGGT CAACCAGACC ACCGCAGAGA ACGTTCCCGA GCTGTTCGCT
CGCAACGAGC GTGTGGTCTG CCTGTTCGAT ACCGAACGTG GGCCAATGGC TGTGGTGCTG
GTTGGCGCGA TGATCGTTGC CTCGATCGAA ACCGTATGGG CCGGGCTGGT CACGCCGCCA
AAGCGTGAGC TGAAAACCTT CCGTTACGAC GAAGCCAGCC GCGCGCCGAT CCATCTGGAA
AAGGGCGCCG AGCTGGGCCG CTTCAAGCTG GGCTCGACCG CCATCGTGCT GTTCGGGCCG
GAGCAGGTGA GGTGGGCTGA AAGCCTGGGT GCTGGTTCTG CAGTGCGCAT GGGGCAACTG
CTGGCAGAGC CTGTACAGGC TTGA
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| Protein sequence | MKSRLFIISQ YLLPHHLLSR LAGCVAECRA RWFKNAFTAW FAKRYQVNMS EALVEDLSAY
EHFNAFFTRA LKPGARPLDE TPGAILCPAD GAVSQLGPIE HGRIFQAKGH GFSAQELLGG
DPAMAAPFMG GEFATIYLSP KDYHRVHMPL AGTLREMVYV PGRLFSVNQT TAENVPELFA
RNERVVCLFD TERGPMAVVL VGAMIVASIE TVWAGLVTPP KRELKTFRYD EASRAPIHLE
KGAELGRFKL GSTAIVLFGP EQVRWAESLG AGSAVRMGQL LAEPVQA
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