Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4960 |
Symbol | |
ID | 5872775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5533182 |
End bp | 5533991 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641550098 |
Product | rhodanese domain-containing protein |
Protein accession | YP_001671180 |
Protein GI | 167035949 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2897] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.742551 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGACT TTTCCGGCCT GCCCCTGGTG ATCGAAGCTG CAGACCTGCT GCCACGCCTG GATTCGCCGC AGCTGATCCT GGTCGACCTG AGCAGCGCCA ACCGCTATGT CAGCGGGCAT ATCCCCGGCG CACGCTTTGT CGAAGGCAAG CGCACCCAGC TTGGCCAGCC ACCCGCGCCC GGCCTGCTGC CGGCCCTGGG CGAACTGGAA AAACTGTTCA GCGAACTCGG CCATCGCGAC GACGCCGTGT ATGTGGTGTA CGACGATGAA GGCGGCGGCT GGGCGGGGCG TTTCATCTGG CTGCTCGATG TGATCGGGCA CAAGGGCTAC CACTACCTCA ATGGCGGTAT CCAGGCCTGG CCGGCAGATA CGCTGTCCAC TGAAGTGCCC GCCAGCGGCA ACACCCCGGT ACGCCTGCGT ATCGACAGCG CCCCCACGGC CACGCGCGAG TACCTGCAAA GCCGCCTGGG CGCCGATGAC CTGGTCATCT GGGACGCGCG CGGCCCGCAG GAATTCAGTG GCGAGAAAGT GCTGGCAGCC AAGGGCGGCC ACATCCCCGG TGCGATCAAC TTCGAGTGGA CCGCCGGCAT GGACCTCAAC GACCACCTGC GCATTCGCCA GGACATCGCC GACGTCCTGC TGGAGCTGGG CATCACACCG GACAAGGAAG TGATCACCCA TTGCCAGACC CACCGCCGCT CCGGCTTCAC TTATCTGGTG GCCAAGGCCC TCGGCTACCC ACGCGTCAAG GCTTACGCCG GCTCGTGGAG CGAATGGGGC AACCACCCGG ACACGCCTGT AGAAGTTTAA
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Protein sequence | MTDFSGLPLV IEAADLLPRL DSPQLILVDL SSANRYVSGH IPGARFVEGK RTQLGQPPAP GLLPALGELE KLFSELGHRD DAVYVVYDDE GGGWAGRFIW LLDVIGHKGY HYLNGGIQAW PADTLSTEVP ASGNTPVRLR IDSAPTATRE YLQSRLGADD LVIWDARGPQ EFSGEKVLAA KGGHIPGAIN FEWTAGMDLN DHLRIRQDIA DVLLELGITP DKEVITHCQT HRRSGFTYLV AKALGYPRVK AYAGSWSEWG NHPDTPVEV
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