Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4958 |
Symbol | |
ID | 5872773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5530620 |
End bp | 5531471 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641550096 |
Product | flagellar motor protein MotA |
Protein accession | YP_001671178 |
Protein GI | 167035947 |
COG category | [N] Cell motility |
COG ID | [COG1291] Flagellar motor component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.915585 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTAAAA TTATCGGCAT CATCGTCGTA TTCGCGAGCG TGCTCGGCGG CTACGTGCTC TCCCACGGCA AAATCGCAGC GCTGATCCAG CCGTTCGAAG TACTGATCAT TGGCGGTGCG GCCTTTGGTG CGTTCCTGCA GGCCAACCCT GGCCACATGA CCATGCACGT CATCAAGAAG TCGATGAAAA TGTTCGGCTC GCGCTTCAGT CATGCCTTCT ATCTGGAGGT GTTGGGCCTG GTGTACGAGA TCCTCAACAA GAGCCGTCGC GAAGGCATGA TGGCCATCGA GGCCGACATC GAGGACGCCG CCGCCAGCCC GATTTTCGCC AAGTACCCGA CGGTACTGGC CGATGAACGC ATGACTGCGT TCGTCTGCGA CTACCTGCGC ATCATGTCTA CCGGCAACAT GGCCCCGCAC GAGCTCGAGG GCCTGTTCGA CATGGAACTG CTGAGCATGA AAGAAGAGCT GGAGCACCCG TCGCACGCGG TGACCGGCAT CGCCGACGGC ATGCCGGGCT TCGGCATCGT CGCGGCGGTA CTGGGTATCG TGGTGACCAT GGCCTCGCTG GGCGAAGGTG ACCAGGCGGC CATCGGCATG CACGTGGGTG CGGCGCTGGT CGGTACCTTC TTCGGTATTC TGGCGGCCTA CGGCTTCTTC GGCCCGTTGG CCAAGTGCCT GGAGCACGAC GCCAAGGAAG AGCTGAACCT GTACGAATCG ATCAAGGCTT CGCTGGTGGC CTCTGCCTCG GGCATGCCGC CTTCGTTGGC GGTCGAGTTC GGGCGCAAGG TGCTGTACCC CAAGCACCGC CCAAGCTTCG CCGAACTGGA ACAAGCGGTT CGCGGTCGCT GA
|
Protein sequence | MAKIIGIIVV FASVLGGYVL SHGKIAALIQ PFEVLIIGGA AFGAFLQANP GHMTMHVIKK SMKMFGSRFS HAFYLEVLGL VYEILNKSRR EGMMAIEADI EDAAASPIFA KYPTVLADER MTAFVCDYLR IMSTGNMAPH ELEGLFDMEL LSMKEELEHP SHAVTGIADG MPGFGIVAAV LGIVVTMASL GEGDQAAIGM HVGAALVGTF FGILAAYGFF GPLAKCLEHD AKEELNLYES IKASLVASAS GMPPSLAVEF GRKVLYPKHR PSFAELEQAV RGR
|
| |