Gene PputGB1_4953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4953 
Symbol 
ID5872768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5526431 
End bp5527042 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content62% 
IMG OID641550091 
Producthypothetical protein 
Protein accessionYP_001671173 
Protein GI167035942 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.58893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.356767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTTGA TGCTCTATCT CGTTGCCATC ACCGCCGAAG CCATGACTGG CGCGCTGTCT 
GCCGGGCGTC GCGGCATGGA CTGGTTCGGC GTGGTGCTGA TTGCCTGCGT CACCGCCCTG
GGGGGCGGCT CGGTGCGTGA TGTGCTGCTC GGGCACTACC CGCTGACCTG GGTGAAGCAC
CCCGAGTACC TGGTGTTGAC CAGCTTTGCG GCGCTGCTGA CTATTTTCAT TGCGCCGATG
ATGCGCCGCC TGCGCTCGCT GTTTCTGGTG CTCGATGCCC TGGGGCTGGT GGCGTTTACC
CTGATTGGCT GCATGACGGC GCTGGAAATG GGGCAGGGCA TGCTGGTGGC GTCCATCAGC
GGGGTGATCA CCGGGGTGTT TGGCGGCATC CTGCGGGATA TCTTCTGCAA CGACATCCCG
CTGGTGTTCC GTCGCGAACT GTATGCCAGC GTGTCGTTCG CGGCGGCGTG GTTCTATCTG
GGCTGCGTGT ATTTCAAGGT GCCGGCGGAG CAGGCGATGC TGCTGACCTT GTTTGGCGGT
TTCCTGCTGC GCCTGTTGGC GATTCGCTTC CACTGGGAAA TGCCCAAGTT CCACTACAAC
GACCAGCAGT GA
 
Protein sequence
MLLMLYLVAI TAEAMTGALS AGRRGMDWFG VVLIACVTAL GGGSVRDVLL GHYPLTWVKH 
PEYLVLTSFA ALLTIFIAPM MRRLRSLFLV LDALGLVAFT LIGCMTALEM GQGMLVASIS
GVITGVFGGI LRDIFCNDIP LVFRRELYAS VSFAAAWFYL GCVYFKVPAE QAMLLTLFGG
FLLRLLAIRF HWEMPKFHYN DQQ