Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4953 |
Symbol | |
ID | 5872768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5526431 |
End bp | 5527042 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641550091 |
Product | hypothetical protein |
Protein accession | YP_001671173 |
Protein GI | 167035942 |
COG category | [S] Function unknown |
COG ID | [COG2860] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.58893 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.356767 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGTTGA TGCTCTATCT CGTTGCCATC ACCGCCGAAG CCATGACTGG CGCGCTGTCT GCCGGGCGTC GCGGCATGGA CTGGTTCGGC GTGGTGCTGA TTGCCTGCGT CACCGCCCTG GGGGGCGGCT CGGTGCGTGA TGTGCTGCTC GGGCACTACC CGCTGACCTG GGTGAAGCAC CCCGAGTACC TGGTGTTGAC CAGCTTTGCG GCGCTGCTGA CTATTTTCAT TGCGCCGATG ATGCGCCGCC TGCGCTCGCT GTTTCTGGTG CTCGATGCCC TGGGGCTGGT GGCGTTTACC CTGATTGGCT GCATGACGGC GCTGGAAATG GGGCAGGGCA TGCTGGTGGC GTCCATCAGC GGGGTGATCA CCGGGGTGTT TGGCGGCATC CTGCGGGATA TCTTCTGCAA CGACATCCCG CTGGTGTTCC GTCGCGAACT GTATGCCAGC GTGTCGTTCG CGGCGGCGTG GTTCTATCTG GGCTGCGTGT ATTTCAAGGT GCCGGCGGAG CAGGCGATGC TGCTGACCTT GTTTGGCGGT TTCCTGCTGC GCCTGTTGGC GATTCGCTTC CACTGGGAAA TGCCCAAGTT CCACTACAAC GACCAGCAGT GA
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Protein sequence | MLLMLYLVAI TAEAMTGALS AGRRGMDWFG VVLIACVTAL GGGSVRDVLL GHYPLTWVKH PEYLVLTSFA ALLTIFIAPM MRRLRSLFLV LDALGLVAFT LIGCMTALEM GQGMLVASIS GVITGVFGGI LRDIFCNDIP LVFRRELYAS VSFAAAWFYL GCVYFKVPAE QAMLLTLFGG FLLRLLAIRF HWEMPKFHYN DQQ
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