Gene PputGB1_4951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4951 
Symbol 
ID5872766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5524415 
End bp5525338 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content69% 
IMG OID641550089 
Productcarbohydrate kinase, YjeF related protein 
Protein accessionYP_001671171 
Protein GI167035940 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0063] Predicted sugar kinase 
TIGRFAM ID[TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.479254 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.232956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAGG CAATACGGGC TCAGGTGCGT ATAATTCTGC CAGACATTGG AGCCTTTGAC 
CCCATGCCGC AGACCAAACA CCCCAGCAAT GCCCCTCAAT TGCTCAGCAG CGTGACCGTG
GCGCACCTGC CGGCACGCCA CGCGCTTGCC CATAAAGGTG ACTTTGGCCA TGTGCTGGTG
GTCGGTGGCG ACCTCGGCAC GGGTGGCGCC GTATTGCTCA GTGCCGAAGC CGCCCTGCGT
TGCGGGGCCG GGCTGGTCAG CGTGGCAACC CGGCCGGAGC ATGTAGCGGC CAGCCTGGCG
CGCCTGCCCG AAGTCATGTG CCTTGGCGCC AGTTCGGCCA ACCAGCTGAT GGGCGTGCTG
GAGCGCGCCT CGGTGCTGGT GGTCGGTCCG GGCCTCGGGC AGGCGGCGTG GGGCCGCAGC
CTGTTGTCGG CGGTGGCCAA CGCCGAGCGG CCGCAGGTGT GGGATGCCGA TGCCCTGAAT
TTGCTGGCGC GCACCCCGCT GGCCTTGCCC AGTGGCAGTA TCCTCACCCC TCACCCGGGG
GAGGCGGCGC GGCTGCTGGG CATTTCCACC GAGGCCGTGC AGGCCGACCG CCCAGGGGCT
GCGCGCAAGT TGGCGCGCCG TTACAACAGC GTCTGCGTAC TCAAAGGTGC CGGCACCCTG
GTGGCCGCAC CGGCCGGGCA ACTGGCGCTA TGCGAGCGCG GCCACCCGGC GATGGCTGGC
GCCGGGCTGG GCGACGTGCT GACCGGCGTG CTGGCGGCAC TGTTGGCCCA AGGCCTGGAC
GCCTGGAGCG CGGGTTGCTT GGGAACATGG CTGCACGCCT GTGCGGGCGA GCGTCTGGGG
GTAAAAGGTA GAGGCCTGGC GGCCAGTGAT CTGGCGCCGG TCATTCGTGA GTTGTTGGAG
GAGCATTCTG CGTGTCTGGC TTAA
 
Protein sequence
MGKAIRAQVR IILPDIGAFD PMPQTKHPSN APQLLSSVTV AHLPARHALA HKGDFGHVLV 
VGGDLGTGGA VLLSAEAALR CGAGLVSVAT RPEHVAASLA RLPEVMCLGA SSANQLMGVL
ERASVLVVGP GLGQAAWGRS LLSAVANAER PQVWDADALN LLARTPLALP SGSILTPHPG
EAARLLGIST EAVQADRPGA ARKLARRYNS VCVLKGAGTL VAAPAGQLAL CERGHPAMAG
AGLGDVLTGV LAALLAQGLD AWSAGCLGTW LHACAGERLG VKGRGLAASD LAPVIRELLE
EHSACLA