Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4951 |
Symbol | |
ID | 5872766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5524415 |
End bp | 5525338 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641550089 |
Product | carbohydrate kinase, YjeF related protein |
Protein accession | YP_001671171 |
Protein GI | 167035940 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0063] Predicted sugar kinase |
TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.479254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.232956 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAAGG CAATACGGGC TCAGGTGCGT ATAATTCTGC CAGACATTGG AGCCTTTGAC CCCATGCCGC AGACCAAACA CCCCAGCAAT GCCCCTCAAT TGCTCAGCAG CGTGACCGTG GCGCACCTGC CGGCACGCCA CGCGCTTGCC CATAAAGGTG ACTTTGGCCA TGTGCTGGTG GTCGGTGGCG ACCTCGGCAC GGGTGGCGCC GTATTGCTCA GTGCCGAAGC CGCCCTGCGT TGCGGGGCCG GGCTGGTCAG CGTGGCAACC CGGCCGGAGC ATGTAGCGGC CAGCCTGGCG CGCCTGCCCG AAGTCATGTG CCTTGGCGCC AGTTCGGCCA ACCAGCTGAT GGGCGTGCTG GAGCGCGCCT CGGTGCTGGT GGTCGGTCCG GGCCTCGGGC AGGCGGCGTG GGGCCGCAGC CTGTTGTCGG CGGTGGCCAA CGCCGAGCGG CCGCAGGTGT GGGATGCCGA TGCCCTGAAT TTGCTGGCGC GCACCCCGCT GGCCTTGCCC AGTGGCAGTA TCCTCACCCC TCACCCGGGG GAGGCGGCGC GGCTGCTGGG CATTTCCACC GAGGCCGTGC AGGCCGACCG CCCAGGGGCT GCGCGCAAGT TGGCGCGCCG TTACAACAGC GTCTGCGTAC TCAAAGGTGC CGGCACCCTG GTGGCCGCAC CGGCCGGGCA ACTGGCGCTA TGCGAGCGCG GCCACCCGGC GATGGCTGGC GCCGGGCTGG GCGACGTGCT GACCGGCGTG CTGGCGGCAC TGTTGGCCCA AGGCCTGGAC GCCTGGAGCG CGGGTTGCTT GGGAACATGG CTGCACGCCT GTGCGGGCGA GCGTCTGGGG GTAAAAGGTA GAGGCCTGGC GGCCAGTGAT CTGGCGCCGG TCATTCGTGA GTTGTTGGAG GAGCATTCTG CGTGTCTGGC TTAA
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Protein sequence | MGKAIRAQVR IILPDIGAFD PMPQTKHPSN APQLLSSVTV AHLPARHALA HKGDFGHVLV VGGDLGTGGA VLLSAEAALR CGAGLVSVAT RPEHVAASLA RLPEVMCLGA SSANQLMGVL ERASVLVVGP GLGQAAWGRS LLSAVANAER PQVWDADALN LLARTPLALP SGSILTPHPG EAARLLGIST EAVQADRPGA ARKLARRYNS VCVLKGAGTL VAAPAGQLAL CERGHPAMAG AGLGDVLTGV LAALLAQGLD AWSAGCLGTW LHACAGERLG VKGRGLAASD LAPVIRELLE EHSACLA
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