Gene PputGB1_4950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4950 
Symbol 
ID5872765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5523954 
End bp5524427 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content60% 
IMG OID641550088 
Producthypothetical protein 
Protein accessionYP_001671170 
Protein GI167035939 
COG category[R] General function prediction only 
COG ID[COG0802] Predicted ATPase or kinase 
TIGRFAM ID[TIGR00150] ATPase, YjeE family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.070486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.198333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTGGCT TAAATCTGTT TCTGGCCGAT GAAGCGGCCA CGGTCGACTT CGGTGCAAAA 
ATGGCCGAGG TGACCGGTGG TCGCGGCGTG ATCTTTCTTG AAGGCGACCT GGGGGCGGGC
AAGACTACGC TTTCCCGGGG GCTGATCCGT GGCCTGGGCC ATACTGGTGC AGTGAAAAGC
CCGACCTTTA CCGTGGTCGA ACCCTACGAA ATCGGCGAGG TCCGAGCCTT TCACTTCGAC
CTGTATCGCC TGGTCGACCC GGAGGAGCTT GAGTTCATGG GTATTCGTGA TTATTTCGAG
GGCGACCCGC TGTGCCTGTT CGAGTGGCCA CAAAAGGGTG CGGGCGTTTT GCCAAAGCCT
GACCTGACCA TTACCATAAG CCCCCAAGCG GGCGGACGCT CGCTGATCCT TTCGCCGCAG
GGGGCTCGCG GCGAGGCCTG GTGCGTGGCA CTGGCCGAAC ACTATAAACA GTAA
 
Protein sequence
MSGLNLFLAD EAATVDFGAK MAEVTGGRGV IFLEGDLGAG KTTLSRGLIR GLGHTGAVKS 
PTFTVVEPYE IGEVRAFHFD LYRLVDPEEL EFMGIRDYFE GDPLCLFEWP QKGAGVLPKP
DLTITISPQA GGRSLILSPQ GARGEAWCVA LAEHYKQ