Gene PputGB1_4948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4948 
SymbolmutL 
ID5872763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5520614 
End bp5522512 
Gene Length1899 bp 
Protein Length632 aa 
Translation table11 
GC content66% 
IMG OID641550086 
ProductDNA mismatch repair protein 
Protein accessionYP_001671168 
Protein GI167035937 
COG category[L] Replication, recombination and repair 
COG ID[COG0323] DNA mismatch repair enzyme (predicted ATPase) 
TIGRFAM ID[TIGR00585] DNA mismatch repair protein MutL 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.167425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.037125 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCG GTTCGCGCAT TCAGCTGCTT AGCCCGCGGC TGGCCAACCA GATTGCCGCC 
GGCGAGGTTG TCGAGCGGCC GGCTTCTGTC GCCAAGGAAT TGCTGGAAAA CAGCCTGGAC
TCCGGTGCCC GGCGCATCGA TGTGGAAGTG GAGCAGGGCG GCGTCAAGCT GCTGAAGGTA
CGGGACGATG GCAGCGGTAT TTCTGCCGAT GACCTGCCGC TGGCCCTGGC GCGTCACGCC
ACCAGCAAGA TTCGTGAGCT TGAGGACCTG GAAGGCGTCA TGAGCCTGGG CTTCCGTGGC
GAGGCGCTGG CCTCGATCAG CTCGGTGGCG CGTTTGACCA TGACCTCCCG TACTGCCAGT
GCCAGCGAGG CCTGGCAGGT GGAAACCGAA GGCCGCGACA TGACCCCACG GGTGCAGCCA
GCGGCGCACC CGGTCGGGAC CTCGGTGGAA GTGCGCGACC TGTTCTTCAA TACCCCGGCC
CGGCGCAAGT TCCTCAAGGC CGAAAAAACC GAATTCGACC ACCTGCAGGA AGTGATCCGC
CGGCTGGCGC TGGCGCGTTT CGATGTCGGC TTCCACCTGC GCCACAACGG CAAGAGCATC
CTCAGCCTGC ACGAGGCTCA CGACGAAACC GCCCGTGCAC GGCGGGTGGG TGCCATCTGC
GGCCCTGGCT TCATGGAGCA GGCGCTGCCG ATCGACGTCG AGCGCAACGG CCTGCGCCTG
TGGGGCTGGG TTGGCCTGCC GACGTTCTCG CGCAGCCAGG CCGACTTGCA GTACTTCTTC
GTCAACGGCC GCGCGGTGCG CGACAAGCTG GTCGCCCACG CCGTGCGCCA GGCCTACCGC
GATGTGTTGT TCAATGGTCG TCACCCCACG TTCGTGCTGT TCCTGGAGCT GGAGCCCAAC
GGCGTCGATG TGAACGTGCA CCCGACCAAG CATGAAGTGC GCTTCCGCGA AGGGCGCTCG
GTGCACGATT TCCTGTATGG CACTTTGCAC CGAGCCCTGG CTGATGTTCG CCCGGAAGAC
CAACTGGCCG CGCCTGCCGC CGTGCCCGAG CTGGCTCGCC CCACTGGCCA GCAGGCTGGT
GAGTTCGGCC CCCAGGGTGA AATGCGCCTG GCCTCGCCGG TGCTCGAACA GCCGCGAGCC
CCGCAACAGT CATTTTCCAA TGGCGGCAGT GGCGCCGGTT ACCAGTACCA GTACACCCCG
CGTCCTTCGC AGCCGCTGCC GGCCGCCGAG GCGCAGGCGG TGTATCGCGA GTTCTACAAG
CCGTTGGACA ACGGTGCCGC AGCTGCGACG GCCTTGCCCG AAAGCCAAGG TGACATTCCC
CCGCTTGGCT ACGCGCTGGC GCAGCTCAAG GGTATCTACA TCCTGGCCGA GAATGCCGTC
GGCCTGGTGC TGGTGGACAT GCACGCCGCC CATGAGCGGA TCATGTACGA GCGGCTCAAG
GTGGCCATGG CCAGCGAGGG CCTCAGTGGC CAGCCGCTGC TGGTGCCGGA AACCCTGGCC
CTGAGCCAGC GTGAGGCCGA CTGTGCCGAA GAGCATGCTC AGTGGTTCCA GCGCCTGGGC
TTCGAATTGC AACGCCTGGG CCCCGAGACC TTGGCGGTTC GCCAGATCCC GGCCTTGCTC
AAGCAGGCCG AGGCCAACCG CCTGGTGCAG GACGTGCTGG CCGACTTGAT GGAATACGGC
ACCAGCGACC GTATTCAGGC GCACCTCAAC GAACTGCTCG GTACCATGGC CTGCCATGGC
GCCGTGCGCG CCAACCGGCG CCTGGCAATT CCCGAGATGA ACGCCCTGCT GCGCGACATG
GAAAACACCG AGCGCAGCGG CCAGTGCAAC CATGGCCGTC CCACCTGGAC CCAGATGGGC
CTGGACGACC TGGACAAACT CTTCCTGCGC GGTCGATGA
 
Protein sequence
MSGGSRIQLL SPRLANQIAA GEVVERPASV AKELLENSLD SGARRIDVEV EQGGVKLLKV 
RDDGSGISAD DLPLALARHA TSKIRELEDL EGVMSLGFRG EALASISSVA RLTMTSRTAS
ASEAWQVETE GRDMTPRVQP AAHPVGTSVE VRDLFFNTPA RRKFLKAEKT EFDHLQEVIR
RLALARFDVG FHLRHNGKSI LSLHEAHDET ARARRVGAIC GPGFMEQALP IDVERNGLRL
WGWVGLPTFS RSQADLQYFF VNGRAVRDKL VAHAVRQAYR DVLFNGRHPT FVLFLELEPN
GVDVNVHPTK HEVRFREGRS VHDFLYGTLH RALADVRPED QLAAPAAVPE LARPTGQQAG
EFGPQGEMRL ASPVLEQPRA PQQSFSNGGS GAGYQYQYTP RPSQPLPAAE AQAVYREFYK
PLDNGAAAAT ALPESQGDIP PLGYALAQLK GIYILAENAV GLVLVDMHAA HERIMYERLK
VAMASEGLSG QPLLVPETLA LSQREADCAE EHAQWFQRLG FELQRLGPET LAVRQIPALL
KQAEANRLVQ DVLADLMEYG TSDRIQAHLN ELLGTMACHG AVRANRRLAI PEMNALLRDM
ENTERSGQCN HGRPTWTQMG LDDLDKLFLR GR