Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4948 |
Symbol | mutL |
ID | 5872763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5520614 |
End bp | 5522512 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641550086 |
Product | DNA mismatch repair protein |
Protein accession | YP_001671168 |
Protein GI | 167035937 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
TIGRFAM ID | [TIGR00585] DNA mismatch repair protein MutL |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.167425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.037125 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCG GTTCGCGCAT TCAGCTGCTT AGCCCGCGGC TGGCCAACCA GATTGCCGCC GGCGAGGTTG TCGAGCGGCC GGCTTCTGTC GCCAAGGAAT TGCTGGAAAA CAGCCTGGAC TCCGGTGCCC GGCGCATCGA TGTGGAAGTG GAGCAGGGCG GCGTCAAGCT GCTGAAGGTA CGGGACGATG GCAGCGGTAT TTCTGCCGAT GACCTGCCGC TGGCCCTGGC GCGTCACGCC ACCAGCAAGA TTCGTGAGCT TGAGGACCTG GAAGGCGTCA TGAGCCTGGG CTTCCGTGGC GAGGCGCTGG CCTCGATCAG CTCGGTGGCG CGTTTGACCA TGACCTCCCG TACTGCCAGT GCCAGCGAGG CCTGGCAGGT GGAAACCGAA GGCCGCGACA TGACCCCACG GGTGCAGCCA GCGGCGCACC CGGTCGGGAC CTCGGTGGAA GTGCGCGACC TGTTCTTCAA TACCCCGGCC CGGCGCAAGT TCCTCAAGGC CGAAAAAACC GAATTCGACC ACCTGCAGGA AGTGATCCGC CGGCTGGCGC TGGCGCGTTT CGATGTCGGC TTCCACCTGC GCCACAACGG CAAGAGCATC CTCAGCCTGC ACGAGGCTCA CGACGAAACC GCCCGTGCAC GGCGGGTGGG TGCCATCTGC GGCCCTGGCT TCATGGAGCA GGCGCTGCCG ATCGACGTCG AGCGCAACGG CCTGCGCCTG TGGGGCTGGG TTGGCCTGCC GACGTTCTCG CGCAGCCAGG CCGACTTGCA GTACTTCTTC GTCAACGGCC GCGCGGTGCG CGACAAGCTG GTCGCCCACG CCGTGCGCCA GGCCTACCGC GATGTGTTGT TCAATGGTCG TCACCCCACG TTCGTGCTGT TCCTGGAGCT GGAGCCCAAC GGCGTCGATG TGAACGTGCA CCCGACCAAG CATGAAGTGC GCTTCCGCGA AGGGCGCTCG GTGCACGATT TCCTGTATGG CACTTTGCAC CGAGCCCTGG CTGATGTTCG CCCGGAAGAC CAACTGGCCG CGCCTGCCGC CGTGCCCGAG CTGGCTCGCC CCACTGGCCA GCAGGCTGGT GAGTTCGGCC CCCAGGGTGA AATGCGCCTG GCCTCGCCGG TGCTCGAACA GCCGCGAGCC CCGCAACAGT CATTTTCCAA TGGCGGCAGT GGCGCCGGTT ACCAGTACCA GTACACCCCG CGTCCTTCGC AGCCGCTGCC GGCCGCCGAG GCGCAGGCGG TGTATCGCGA GTTCTACAAG CCGTTGGACA ACGGTGCCGC AGCTGCGACG GCCTTGCCCG AAAGCCAAGG TGACATTCCC CCGCTTGGCT ACGCGCTGGC GCAGCTCAAG GGTATCTACA TCCTGGCCGA GAATGCCGTC GGCCTGGTGC TGGTGGACAT GCACGCCGCC CATGAGCGGA TCATGTACGA GCGGCTCAAG GTGGCCATGG CCAGCGAGGG CCTCAGTGGC CAGCCGCTGC TGGTGCCGGA AACCCTGGCC CTGAGCCAGC GTGAGGCCGA CTGTGCCGAA GAGCATGCTC AGTGGTTCCA GCGCCTGGGC TTCGAATTGC AACGCCTGGG CCCCGAGACC TTGGCGGTTC GCCAGATCCC GGCCTTGCTC AAGCAGGCCG AGGCCAACCG CCTGGTGCAG GACGTGCTGG CCGACTTGAT GGAATACGGC ACCAGCGACC GTATTCAGGC GCACCTCAAC GAACTGCTCG GTACCATGGC CTGCCATGGC GCCGTGCGCG CCAACCGGCG CCTGGCAATT CCCGAGATGA ACGCCCTGCT GCGCGACATG GAAAACACCG AGCGCAGCGG CCAGTGCAAC CATGGCCGTC CCACCTGGAC CCAGATGGGC CTGGACGACC TGGACAAACT CTTCCTGCGC GGTCGATGA
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Protein sequence | MSGGSRIQLL SPRLANQIAA GEVVERPASV AKELLENSLD SGARRIDVEV EQGGVKLLKV RDDGSGISAD DLPLALARHA TSKIRELEDL EGVMSLGFRG EALASISSVA RLTMTSRTAS ASEAWQVETE GRDMTPRVQP AAHPVGTSVE VRDLFFNTPA RRKFLKAEKT EFDHLQEVIR RLALARFDVG FHLRHNGKSI LSLHEAHDET ARARRVGAIC GPGFMEQALP IDVERNGLRL WGWVGLPTFS RSQADLQYFF VNGRAVRDKL VAHAVRQAYR DVLFNGRHPT FVLFLELEPN GVDVNVHPTK HEVRFREGRS VHDFLYGTLH RALADVRPED QLAAPAAVPE LARPTGQQAG EFGPQGEMRL ASPVLEQPRA PQQSFSNGGS GAGYQYQYTP RPSQPLPAAE AQAVYREFYK PLDNGAAAAT ALPESQGDIP PLGYALAQLK GIYILAENAV GLVLVDMHAA HERIMYERLK VAMASEGLSG QPLLVPETLA LSQREADCAE EHAQWFQRLG FELQRLGPET LAVRQIPALL KQAEANRLVQ DVLADLMEYG TSDRIQAHLN ELLGTMACHG AVRANRRLAI PEMNALLRDM ENTERSGQCN HGRPTWTQMG LDDLDKLFLR GR
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