| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4947 |
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| Symbol | miaA |
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| ID | 5872762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5519641 |
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| End bp | 5520612 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641550085 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_001671167 |
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| Protein GI | 167035936 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.360351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0267266 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCA AGCCCCCTGC AATATTCCTG ATGGGCCCGA CGGCGGCCGG CAAGACCGAC
CTGGCCATCG AGCTGACCAA AGTGCTGCCC TGTGAACTGA TCAGCGTCGA TTCGGCACTG
GTCTACCGGG GCATGGACAT CGGCTCGGCC AAACCCTCGA AAGAAATCCT CGCCGCCCAC
CCGCACCGGC TGATCGACAT TCGTGACCCG GCCGAGAGCT ATTCGGCCGC ACAGTTCCGT
GCCGATGCCT TGGAGGCCAT GGCCGAGATC ACTGCGCGCG GCAAGATCCC GTTGCTGGTC
GGCGGCACCA TGCTCTATTA CAAGGCGTTG ATCGATGGCC TGGCCGACAT GCCGGCGGCC
GATGCCGCAG TGCGCGCCGA GCTGGAAGCC CAGGCCGAAG CCTTGGGGCT GGCCGAGTTG
CACCGTCAAC TGGCCGAGGT CGACCCGGTG TCGGCGGCGC GCATCCACCC CAACGACCCG
CAGCGGCTGA TCCGGGCGCT GGAGGTATAC CGGGTGAGCG GCGAGAGCAT GACGGCCCAT
CGTCAACGTC AATTCGCGGA AAGTCGCGGC GCAGACGCAG GCGCTGGCGG ACATTTGCCC
TATACTGTCG CCAGTTTGGC GATTGCTCCT ACAGATCGTC ACATTTTGCA TCAGCGAATT
GCGTTACGAT TTTCGCAGAT GCTGGAACAG GGCTTCGTTG AGGAGGTCCG ATCGCTGCGA
GCCAGAAGTG ACTTGCACGC CGGGCTGCCG TCTATACGGG CAGTGGGTTA TCGGCAAGTC
TGGGATTACC TGGACGGCAA GCTGACTGAG AATGAGATGC GTGAACGCGG TATCATTGCT
ACTCGGCAGC TGGCCAAACG GCAGTTCACC TGGTTGCGTG GCTGGCCTGA AGTGCACTGG
CTTGACAGCC TGGCCTGCGA CAATCTGTCC CGCACCTTGA AATACCTTGG GGCCATCTCC
ATATTGAGCT GA
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| Protein sequence | MSSKPPAIFL MGPTAAGKTD LAIELTKVLP CELISVDSAL VYRGMDIGSA KPSKEILAAH
PHRLIDIRDP AESYSAAQFR ADALEAMAEI TARGKIPLLV GGTMLYYKAL IDGLADMPAA
DAAVRAELEA QAEALGLAEL HRQLAEVDPV SAARIHPNDP QRLIRALEVY RVSGESMTAH
RQRQFAESRG ADAGAGGHLP YTVASLAIAP TDRHILHQRI ALRFSQMLEQ GFVEEVRSLR
ARSDLHAGLP SIRAVGYRQV WDYLDGKLTE NEMRERGIIA TRQLAKRQFT WLRGWPEVHW
LDSLACDNLS RTLKYLGAIS ILS
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