Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4944 |
Symbol | |
ID | 5872759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5516694 |
End bp | 5517875 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641550082 |
Product | HflK protein |
Protein accession | YP_001671164 |
Protein GI | 167035933 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00499727 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTTGGA ACGAGCCGGG TGGCAACTCG AACAATCAGG ATCCCTGGGG CGGCCGCCGT GGTGGCGGTG GCGGTGGTGG TGACAAAAAA GGTCCGCCGG ATCTGGACGA GGCCTTCCGC AAACTGCAGG ACAGCCTCAA CGGCATGTTC GGCGGTAGCA AAAAACGTGG CGGCGGTGAC CGCAATGTCG GCAAGGGCGG TGGCCTGGGC CTGCTGGGCA TTGGCCTGGC GGTACTGGCG GCCATCTGGC TGTACAGCGC CGTGTACGTG GTCGACGAGC AGGAGCAGGC CGTGGTGCTG CGCTTCGGCA AGTACTACGA GACGGTCGGT CCCGGCCTGA ACATCTACTT CCCGCCGATC GATCGCAAGT ACATGGAAAA CGTCACGCGC GAGCGTGCCT ATACCAAGCA GGGCCAGATG CTGACCGAAG ACGAGAACAT CGTCGAGGTG CCGCTGACCG TCCAGTACAA GATCAGCAAC CTTCAGGACT TCGTGCTCAA CGTCGACCAG CCTGAGGTGA GCCTGCAGCA CGCGACCGAC AGTGCCTTGC GCCACGTGGT GGGTTCCACC TCGATGGACC AGGTGCTGAC CGAAGGCCGT GAACAGATGG CCGTGGATAT CCGCGAACGT CTGCAGCGCT TCCTCGACAA CTACCGTACC GGTATCACCG TTACCCAGGT CAACGTACAG AGCGCGGCAG CCCCGCGTGA AGTGCAGGAA GCCTTCGATG ACGTGATCCG TGCCCGCGAA GACGAGCAGC GTGCCCGCAA CCAGGCCGAA TCCTACGCCA ATGGCGTGGT GCCGGAAGCC CGTGGTCAGG CCCAGCGCAT CATCGAGGAC GCCAACGGTT ACCGCGACGA AGTCATCGCC CGCGCCAAGG GTGAGGCCGA CCGATTCACC AAGCTGGTTG CCGAGTACCA CAAGGCACCT GACGTGACCC GTCAGCGTCT GTACCTGGAG ACCATGCAAG AGGTCTACAG CAATTCGAGC AAGGTCATGG TGGCGACCAA GGACGGGCAG AACAACCTGC TCTACCTGCC ACTGGACAAG ATGGTCGAAG GCAGCCGCAA CCCGTCCACG CCAAGCAGCA CTGTGTCGCC ATCGGTCAAC GATGCGGCCG CCCGTGCGGC GCAGGACATG CAACAGCAAC AGCAGCCGCT GCGTACTAGG GAGAGCCGCT GA
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Protein sequence | MAWNEPGGNS NNQDPWGGRR GGGGGGGDKK GPPDLDEAFR KLQDSLNGMF GGSKKRGGGD RNVGKGGGLG LLGIGLAVLA AIWLYSAVYV VDEQEQAVVL RFGKYYETVG PGLNIYFPPI DRKYMENVTR ERAYTKQGQM LTEDENIVEV PLTVQYKISN LQDFVLNVDQ PEVSLQHATD SALRHVVGST SMDQVLTEGR EQMAVDIRER LQRFLDNYRT GITVTQVNVQ SAAAPREVQE AFDDVIRARE DEQRARNQAE SYANGVVPEA RGQAQRIIED ANGYRDEVIA RAKGEADRFT KLVAEYHKAP DVTRQRLYLE TMQEVYSNSS KVMVATKDGQ NNLLYLPLDK MVEGSRNPST PSSTVSPSVN DAAARAAQDM QQQQQPLRTR ESR
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