Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4941 |
Symbol | |
ID | 5872756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5512987 |
End bp | 5514279 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641550079 |
Product | adenylosuccinate synthetase |
Protein accession | YP_001671161 |
Protein GI | 167035930 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0104] Adenylosuccinate synthase |
TIGRFAM ID | [TIGR00184] adenylosuccinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.00348011 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGTAAGA ATGTCGTCGT CCTGGGCACC CAGTGGGGTG ATGAGGGCAA AGGCAAGATC GTCGATCTGC TGACCGAACA TGCTGCCGCC GTAGTGCGCT ACCAAGGTGG CCACAACGCG GGCCACACCC TGGTGATCAA CGGTGAGAAG ACCGTTCTGC ACCTGATTCC GTCCGGCATC CTGCGTGAAG GCGTACAGTG CCTGATCGGC AACGGCGTGG TCGTTGCCCC GGACGCACTG ATGCGTGAAA TCACCAAGCT GGAAGAGAAG GGCGTACCGG TGCGCGAGCG CCTGCGCATC TCCCCGGCTG CGCCGCTGAT CCTGTCGTAC CACGTGGCCC TGGACCAGGC CCGTGAAAAA GCCCGTGGCG AAGCCAAGAT CGGCACCACC GGCCGTGGCA TCGGCCCAGC CTACGAAGAC AAGGTCGCGC GCCGCGGCCT GCGCGTGGGT GACCTGTTCC ACCGCGAGCG TTTCGCTGCC AAGCTGGGTG AACTGCTGGA CTACCACAAC TTCCAGCTGG TGAACTACTA CAAAGAGCCG GCCATCGACT TCCAGCAAAC CCTGGATGAG TGCATGGCCT ACGCCGAACA GCTCAAGCCG ATGATGCTCG ATGTCACCGC CGAGCTGCAC AACCTGCGTC GCGCCGGCAA GGACATCATG TTCGAAGGCG CCCAGGGCTC GCTGCTGGAC ATCGACCACG GTACCTACCC GTACGTCACC AGCTCCAACA CCACTGCTGG CGGTATCTCC ACCGGTTCCG GCGTTGGTCC TATGTACCTG GACTACATCC TGGGTATCAC CAAGGCCTAC ACCACTCGCG TAGGTTCCGG TCCGTTCCCG ACCGAGCTGT TCGACGAGAC CGGCGCTACC CTGGCCAAGC GTGGCCACGA GTTCGGTTCC ACCACTGGCC GTGCCCGTCG TTGCGGCTGG TTCGATGCCG TGATCCTGCG TCGCGCCATC GACGTCAACA GCATCTCGGG CATCTGCCTG ACCAAGCTGG ACGTACTGGA CGGCCTGGAA ACCATCAACA TCTGCGTGGG CTACAAGAAC GAGAACGGTG CTGTCATCGA CGCGCCTTCC GACGCCGACA GCTACATTGG CCTGGAGCCG GTGTACGAAG AGATGCCAGG CTGGAGCGAG TCGACCCTGG GCGTGAAAAC CCTGGAAGAG CTGCCGCAAG CTGCGCGTGA CTACATCAAG CGCATTGAAG AGCTGGTCGG CGCACCGATC GACATCATTT CGACCGGCCC GGACCGCAAC GAGACCATCG TGCTGCGTCA CCCGTTCGCC TGA
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Protein sequence | MGKNVVVLGT QWGDEGKGKI VDLLTEHAAA VVRYQGGHNA GHTLVINGEK TVLHLIPSGI LREGVQCLIG NGVVVAPDAL MREITKLEEK GVPVRERLRI SPAAPLILSY HVALDQAREK ARGEAKIGTT GRGIGPAYED KVARRGLRVG DLFHRERFAA KLGELLDYHN FQLVNYYKEP AIDFQQTLDE CMAYAEQLKP MMLDVTAELH NLRRAGKDIM FEGAQGSLLD IDHGTYPYVT SSNTTAGGIS TGSGVGPMYL DYILGITKAY TTRVGSGPFP TELFDETGAT LAKRGHEFGS TTGRARRCGW FDAVILRRAI DVNSISGICL TKLDVLDGLE TINICVGYKN ENGAVIDAPS DADSYIGLEP VYEEMPGWSE STLGVKTLEE LPQAARDYIK RIEELVGAPI DIISTGPDRN ETIVLRHPFA
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