Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4937 |
Symbol | |
ID | 5872752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5507677 |
End bp | 5508690 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641550075 |
Product | extracellular solute-binding protein |
Protein accession | YP_001671157 |
Protein GI | 167035926 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0000349724 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGATCC GCCCGCAACC GCTGATGCGC ACCTTGGCCG CCGCCGTGCT GAGCCTGGTC ATCGGCGCTC CGGCCGCCAT GGCAGACGCA CCGGTCAGCC TGACCATGTA CAACGGTCAG CACAAGGAAA TCGGCGAAGC CATCGCCAAG GCCTACGAGG CCAAGACCGG TATTCATATC GACATCCGCA AGGGCAGCAG CAACCAGCTG GCCAGCCAGA TCATCGAGGA AGGCGACCGT TCGCCGGCCG ACATCATCTA CACCGAAGAG TCCCCACCCC TGAACAACCT GGGCGAACTG GGCCTGCTGG CGAAGATCGA CGACGCCACC GCGAACATGA TGCCCAAGGA GTACGTTGGC GCCAACGGCA CCTGGATGGG TATCACGGCC CGTACGCGCA TCGTGGTGTA CAACCCGAAG AAGGTCGACG AAAAAGACCT GCCAACCACG GTGATGGACT TCGCCAACCC TGAGTGGGAA GGCCGCGTCG GCTACGTGCC CACCAGTGGT GCGTTCCAGG AGCAGGCCGT GGCCATTCTG AAGATGCATG GCCGCGAAGC CACCGAAGAA TGGCTGACCG GCCTGAAAGC TTTCGGCAAG ACCTACACCA ACAACATGGT CGCCCTCAAA GCCGTGGAAA AAGGCGAAGT GGCGGCGGTC CTGGTGAACA ATTACTACTG GTACGCGCTT GAACGCGAGC GCGGCAAGCT GGACACCAAG CTCTACTACC TGGCCGACGG CGATGCCGGC AACCTGGTCA CCATCTCTGG CGCGGCCGTG GTCAAGGCCA GCAAGCACCC GAAAGAAGCC CAGGCTCTGC TCAACTGGAT GGCCAGCGAA GAGGGCCAAC GCGTGATTAC CCAGACTACC GCCGAGTACC CGCTGCACAA GGGCATGGTT TCGGACCGTG GCCTGAAGCC GTTCAACGAG CTGCGCCCGC CGAACATCTC GCCAGCCGAC CTGGGTAATG CCGAAGAAGC CATCGAGCTC GAGCGCGAGG TCGGTCTGCT CTGA
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Protein sequence | MTIRPQPLMR TLAAAVLSLV IGAPAAMADA PVSLTMYNGQ HKEIGEAIAK AYEAKTGIHI DIRKGSSNQL ASQIIEEGDR SPADIIYTEE SPPLNNLGEL GLLAKIDDAT ANMMPKEYVG ANGTWMGITA RTRIVVYNPK KVDEKDLPTT VMDFANPEWE GRVGYVPTSG AFQEQAVAIL KMHGREATEE WLTGLKAFGK TYTNNMVALK AVEKGEVAAV LVNNYYWYAL ERERGKLDTK LYYLADGDAG NLVTISGAAV VKASKHPKEA QALLNWMASE EGQRVITQTT AEYPLHKGMV SDRGLKPFNE LRPPNISPAD LGNAEEAIEL EREVGLL
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