Gene PputGB1_4937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4937 
Symbol 
ID5872752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5507677 
End bp5508690 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content62% 
IMG OID641550075 
Productextracellular solute-binding protein 
Protein accessionYP_001671157 
Protein GI167035926 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0000349724 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGATCC GCCCGCAACC GCTGATGCGC ACCTTGGCCG CCGCCGTGCT GAGCCTGGTC 
ATCGGCGCTC CGGCCGCCAT GGCAGACGCA CCGGTCAGCC TGACCATGTA CAACGGTCAG
CACAAGGAAA TCGGCGAAGC CATCGCCAAG GCCTACGAGG CCAAGACCGG TATTCATATC
GACATCCGCA AGGGCAGCAG CAACCAGCTG GCCAGCCAGA TCATCGAGGA AGGCGACCGT
TCGCCGGCCG ACATCATCTA CACCGAAGAG TCCCCACCCC TGAACAACCT GGGCGAACTG
GGCCTGCTGG CGAAGATCGA CGACGCCACC GCGAACATGA TGCCCAAGGA GTACGTTGGC
GCCAACGGCA CCTGGATGGG TATCACGGCC CGTACGCGCA TCGTGGTGTA CAACCCGAAG
AAGGTCGACG AAAAAGACCT GCCAACCACG GTGATGGACT TCGCCAACCC TGAGTGGGAA
GGCCGCGTCG GCTACGTGCC CACCAGTGGT GCGTTCCAGG AGCAGGCCGT GGCCATTCTG
AAGATGCATG GCCGCGAAGC CACCGAAGAA TGGCTGACCG GCCTGAAAGC TTTCGGCAAG
ACCTACACCA ACAACATGGT CGCCCTCAAA GCCGTGGAAA AAGGCGAAGT GGCGGCGGTC
CTGGTGAACA ATTACTACTG GTACGCGCTT GAACGCGAGC GCGGCAAGCT GGACACCAAG
CTCTACTACC TGGCCGACGG CGATGCCGGC AACCTGGTCA CCATCTCTGG CGCGGCCGTG
GTCAAGGCCA GCAAGCACCC GAAAGAAGCC CAGGCTCTGC TCAACTGGAT GGCCAGCGAA
GAGGGCCAAC GCGTGATTAC CCAGACTACC GCCGAGTACC CGCTGCACAA GGGCATGGTT
TCGGACCGTG GCCTGAAGCC GTTCAACGAG CTGCGCCCGC CGAACATCTC GCCAGCCGAC
CTGGGTAATG CCGAAGAAGC CATCGAGCTC GAGCGCGAGG TCGGTCTGCT CTGA
 
Protein sequence
MTIRPQPLMR TLAAAVLSLV IGAPAAMADA PVSLTMYNGQ HKEIGEAIAK AYEAKTGIHI 
DIRKGSSNQL ASQIIEEGDR SPADIIYTEE SPPLNNLGEL GLLAKIDDAT ANMMPKEYVG
ANGTWMGITA RTRIVVYNPK KVDEKDLPTT VMDFANPEWE GRVGYVPTSG AFQEQAVAIL
KMHGREATEE WLTGLKAFGK TYTNNMVALK AVEKGEVAAV LVNNYYWYAL ERERGKLDTK
LYYLADGDAG NLVTISGAAV VKASKHPKEA QALLNWMASE EGQRVITQTT AEYPLHKGMV
SDRGLKPFNE LRPPNISPAD LGNAEEAIEL EREVGLL