| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4933 |
|---|
| Symbol | rpsR |
|---|
| ID | 5872746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 5502657 |
|---|
| End bp | 5502887 |
|---|
| Gene Length | 231 bp |
|---|
| Protein Length | 76 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641550069 |
|---|
| Product | 30S ribosomal protein S18 |
|---|
| Protein accession | YP_001671153 |
|---|
| Protein GI | 167035922 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0238] Ribosomal protein S18 |
|---|
| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00000854262 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGTT TCTTCCGTCG TCGTAAATTC TGCCGCTTCA CTGCTGAAGA CGTGAAAGAG
ATCGACTTCA AAGATCTCAA CACCCTGAAA GCTTACGTAT CCGAAACCGG CAAGATCGTT
CCAAGCCGTA TCACCGGTAC CAAAGCTCGT TATCAGCGTC AGCTGGCTAC CGCTATCAAG
CGCGCCCGCT TCCTGGCCCT GCTGCCCTAC ACCGACAGCC ACGGCCGCTG A
|
|---|
| Protein sequence | MARFFRRRKF CRFTAEDVKE IDFKDLNTLK AYVSETGKIV PSRITGTKAR YQRQLATAIK
RARFLALLPY TDSHGR
|
|---|
| |