Gene PputGB1_4929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4929 
Symbol 
ID5872742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5498801 
End bp5499739 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content53% 
IMG OID641550065 
Producthypothetical protein 
Protein accessionYP_001671149 
Protein GI167035918 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0000045925 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATAT TCTACGCGTC TCATCGCCCA ACCCTATTGC TGGATGGCCG TGGATTCACC 
CGTATCTTCA ATGCAGGGCC AGGCACCCTT ACCACGCACC AGGAAAATCA CAGCCGCTTG
ATCGGCAGTG AAATGTCCAA TTCACCCTCT TGCACACTTG ACCAAAACGG CCGCACCCAG
CTGACCTTCA GTGCATACGG CGCTAGGGTC GACCACGGAC AAATACCTGC CTTCAAAGGC
GAGCTTGAGG ATCTGGTCAC CGGCCATTAC CTGCTGGGAA ATGGCTACCG CGCTTACAAC
CCTCATCTCA TGCGTTTCAA CAGTCCAGAC AGCGACAGCC CATTCGCAAA AGGAGGGTTG
AATACCTACT CATTTGCTCT TTGCGACCCG ATCAACCGCC GTGATCCGAC GGGGCACGCT
TTCGAGTTCA TTCGTAAGCT ATTCGTCAAC AAGACCTATC GCGGACCTAT CGTGGCGGAG
TTCGACGGAA TTGTTGTTTT TACTGGGCAA GAACGACCGG ACGGAAAATT ACCCACCCTG
TATATCAGCG CCCATGGCGC TCCAGGCGTG ATAGGTGCTG ACGGCACCAA TACTTACGAT
GCAACACGCA CTTTCAAGGC ACTGACAAGC CGCAATATCC AGCTGCACAA CAGGCAAATT
CATGTACTTG CATGTGACAC AGCTTTCCCC CACCCGCTTA CCGGCAGCTC ATATATCAGC
GACCTAAGCG CCCTTACAAA GTTTCAAGTT TCTGGCTACG CGACCACAGT TGCAGTCGTG
GAGCGCCGTC AAGGCAACGA ATACATTGTA GAGAAACAAA GGGTGCTGCC GCACCATGGA
ATGACATCGA CAAAGACCCG AGCGGGTAAA GGTAGAAAGC AGCAAGACGC CACTGACGAC
ATTCAGGCTG AGATATCCAA GCGGATCAGG ACTGCCTGA
 
Protein sequence
MKIFYASHRP TLLLDGRGFT RIFNAGPGTL TTHQENHSRL IGSEMSNSPS CTLDQNGRTQ 
LTFSAYGARV DHGQIPAFKG ELEDLVTGHY LLGNGYRAYN PHLMRFNSPD SDSPFAKGGL
NTYSFALCDP INRRDPTGHA FEFIRKLFVN KTYRGPIVAE FDGIVVFTGQ ERPDGKLPTL
YISAHGAPGV IGADGTNTYD ATRTFKALTS RNIQLHNRQI HVLACDTAFP HPLTGSSYIS
DLSALTKFQV SGYATTVAVV ERRQGNEYIV EKQRVLPHHG MTSTKTRAGK GRKQQDATDD
IQAEISKRIR TA