Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4929 |
Symbol | |
ID | 5872742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5498801 |
End bp | 5499739 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641550065 |
Product | hypothetical protein |
Protein accession | YP_001671149 |
Protein GI | 167035918 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0000045925 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAATAT TCTACGCGTC TCATCGCCCA ACCCTATTGC TGGATGGCCG TGGATTCACC CGTATCTTCA ATGCAGGGCC AGGCACCCTT ACCACGCACC AGGAAAATCA CAGCCGCTTG ATCGGCAGTG AAATGTCCAA TTCACCCTCT TGCACACTTG ACCAAAACGG CCGCACCCAG CTGACCTTCA GTGCATACGG CGCTAGGGTC GACCACGGAC AAATACCTGC CTTCAAAGGC GAGCTTGAGG ATCTGGTCAC CGGCCATTAC CTGCTGGGAA ATGGCTACCG CGCTTACAAC CCTCATCTCA TGCGTTTCAA CAGTCCAGAC AGCGACAGCC CATTCGCAAA AGGAGGGTTG AATACCTACT CATTTGCTCT TTGCGACCCG ATCAACCGCC GTGATCCGAC GGGGCACGCT TTCGAGTTCA TTCGTAAGCT ATTCGTCAAC AAGACCTATC GCGGACCTAT CGTGGCGGAG TTCGACGGAA TTGTTGTTTT TACTGGGCAA GAACGACCGG ACGGAAAATT ACCCACCCTG TATATCAGCG CCCATGGCGC TCCAGGCGTG ATAGGTGCTG ACGGCACCAA TACTTACGAT GCAACACGCA CTTTCAAGGC ACTGACAAGC CGCAATATCC AGCTGCACAA CAGGCAAATT CATGTACTTG CATGTGACAC AGCTTTCCCC CACCCGCTTA CCGGCAGCTC ATATATCAGC GACCTAAGCG CCCTTACAAA GTTTCAAGTT TCTGGCTACG CGACCACAGT TGCAGTCGTG GAGCGCCGTC AAGGCAACGA ATACATTGTA GAGAAACAAA GGGTGCTGCC GCACCATGGA ATGACATCGA CAAAGACCCG AGCGGGTAAA GGTAGAAAGC AGCAAGACGC CACTGACGAC ATTCAGGCTG AGATATCCAA GCGGATCAGG ACTGCCTGA
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Protein sequence | MKIFYASHRP TLLLDGRGFT RIFNAGPGTL TTHQENHSRL IGSEMSNSPS CTLDQNGRTQ LTFSAYGARV DHGQIPAFKG ELEDLVTGHY LLGNGYRAYN PHLMRFNSPD SDSPFAKGGL NTYSFALCDP INRRDPTGHA FEFIRKLFVN KTYRGPIVAE FDGIVVFTGQ ERPDGKLPTL YISAHGAPGV IGADGTNTYD ATRTFKALTS RNIQLHNRQI HVLACDTAFP HPLTGSSYIS DLSALTKFQV SGYATTVAVV ERRQGNEYIV EKQRVLPHHG MTSTKTRAGK GRKQQDATDD IQAEISKRIR TA
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