| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4924 |
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| Symbol | |
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| ID | 5872737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5492443 |
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| End bp | 5493648 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641550060 |
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| Product | nicotinate phosphoribosyltransferase |
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| Protein accession | YP_001671144 |
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| Protein GI | 167035913 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01514] nicotinate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.588245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000000000198844 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGAAA GCGCATTCGC CGAGCGCATC GTGCACAACC TGCTCGACAC CGACTTCTAC
AAACTCACCA TGATGCAGGG TGTGCTGCAC AACTACCCGG ACGCCGACGT CGAATGGGAA
TTCCGCTGCC GCAACGGCGA GGACTTGCGC CCTTACCTCG GCGAGATCCG CAACCAGCTG
GAACGGCTCA ACGACCTTAC CCTGGACGAT GGCCAACTGC CTTTCCTGGA ACGCATCAGC
TTCCTCAAGC CCGACTTCCT GCGCTTTCTG CGCCTGTTTC GCTTCAACTT GCGCTATGTG
CGCGTCGGCA TCGAGAACGA CCAGCTGTTC CTGCGCCTGA AAGGCCCATG GCTGCATGTA
ATCCTGTTCG AAGTGCCGCT GCTGGCCATC ATCAGCGAAG TGCGCAACCG CCAGCTGCAC
CCGCACATGC GCCTGGCCGA GGCGCGCGAC CAGCTGTACC GCAAGTTCGA CTGGCTGCGC
GCGCATGCCA GCGACGAAGA ACTGGCCGAA CTGCAGGTAG CCGACTTCGG TACCCGTAGA
CGCTTCTCCA GCCGCGTGCA GGAAGAAGTG GTTCGCGTGT TGCGCGATGA TTTTCCGGCC
CGCTTCGTCG GCACCAGCAA TGTCGACCTG GCATGGAAAC TGGATATCAA GCCGCTAGGC
ACCATGGCCC ATGAATGGAT CATGGCCCAC CAGCAGCTCG GCCCACGGCT GATCGACAGC
CAGATTGCCG CGCTGGACTG CTGGGTGCGC GAGTACCGCG GCCTGCTCGG CATCGCACTG
ACCGACTGCA TCACCATGGA TGCCTTCCTC GGCGACTTCG ATCTGTACTT CGCCAAGCTG
TTCGACGGCC TGCGCCACGA CTCGGGCGAG CCGGTGGCCT GGGCAGAAAA GGCCATCGCC
CATTACCAGA AACTGGGTAT CGACCCGATG ACCAAGACCC TGGTGTTTTC CGATGGCCTC
AACCTGACCC GCTCGCTGGA GATCTTCCGT GCCCTGCGCG GTCGCATCAA CGTCAGTTTT
GGCATCGGCA CCAACCTGAC CTGCGACATC CCGGGTGTGG CGCCAATGAG CATCGTGCTT
AAAATGACCG ACTGCAACGG CGCGCCGGTG GCCAAGATCT CGGACGAAGC CGCCAAGACC
CAGTGCCGCG ACGAGAACTT CGTCGCCTAC ATGCGCCACG TATTCAAAGT CCCCAGCAAG
GAGTAA
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| Protein sequence | MSESAFAERI VHNLLDTDFY KLTMMQGVLH NYPDADVEWE FRCRNGEDLR PYLGEIRNQL
ERLNDLTLDD GQLPFLERIS FLKPDFLRFL RLFRFNLRYV RVGIENDQLF LRLKGPWLHV
ILFEVPLLAI ISEVRNRQLH PHMRLAEARD QLYRKFDWLR AHASDEELAE LQVADFGTRR
RFSSRVQEEV VRVLRDDFPA RFVGTSNVDL AWKLDIKPLG TMAHEWIMAH QQLGPRLIDS
QIAALDCWVR EYRGLLGIAL TDCITMDAFL GDFDLYFAKL FDGLRHDSGE PVAWAEKAIA
HYQKLGIDPM TKTLVFSDGL NLTRSLEIFR ALRGRINVSF GIGTNLTCDI PGVAPMSIVL
KMTDCNGAPV AKISDEAAKT QCRDENFVAY MRHVFKVPSK E
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