Gene PputGB1_4922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4922 
Symbol 
ID5872735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5489789 
End bp5490703 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content59% 
IMG OID641550058 
Productinner-membrane translocator 
Protein accessionYP_001671142 
Protein GI167035911 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.75867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000177319 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATGGTA TTTTCCTGCA GCAACTGGTC AACGGCCTGA CCCTCGGGTC GGTCTATGGC 
CTGATCGCCA TCGGCTACAC AATGGTCTAT GGCATCATCG GCATGATCAA CTTCGCGCAC
GGCGAGGTGT ATATGATTTC CGCGTACCTC GCGGCAATCA GCCTGGCATT GCTGGCTTAC
TTCGGCGTCG AGTCGTTCCC GCTACTGATG TTGGGCACGC TGTTGTTCAC CGTCGTCGTC
ACGGGCGTCT ATGGCTTCAC CATCGAGCGC ATCGCCTACA AACCCCTGCG TAACTCCACC
CGCCTGGCGC CGCTGATCAG TGCCATCGGC ATTTCGCTGA TCCTGCAAAA CTACGCACAG
ATCAGCCAGG GCGCCCGCCA GCAAGGCGTG CCAACCTTGC TGGAAGGTGC CATGCGTGTC
GAAGTCGGCA CCGGCTTCGT GCAACTGACC TATACCAAGA TCTTCATTCT GGTGGCAGCC
TTCGTCGGCA TGGGCCTGCT GACCTACGTG ATCAAGTACA CCAAGCTCGG CCGCATGTGC
CGTGCCACCC AGCAAGACCG CAAGATGGCC TCGATCCTGG GCATCAACAC CGACCGGGTA
ATCTCCTACG TGTTCGTCAT CGGCGCCGTG ATGGCCGCCC TGGCCGGCGT GCTGATCACC
ATGAACTACG GCACGTTCGA CTTCTACGCC GGCTTCATCA TCGGTATCAA GGCATTCACC
GCCGCGGTGC TCGGGGGTAT CGGCTCACTG CCTGGCGCCA TGCTCGGCGG CATCATCCTG
GGTATTTCCG AGTCGCTGTT CTCTGGCTTG ATCAACTCCG ACTACAAGGA TGTGTTCAGC
TTCTCGCTGC TGGTGATGAT CCTTATCTTC CGCCCACAAG GCCTGCTGGG TCGCCCGCTC
GTGGCTAAGG TGTGA
 
Protein sequence
MDGIFLQQLV NGLTLGSVYG LIAIGYTMVY GIIGMINFAH GEVYMISAYL AAISLALLAY 
FGVESFPLLM LGTLLFTVVV TGVYGFTIER IAYKPLRNST RLAPLISAIG ISLILQNYAQ
ISQGARQQGV PTLLEGAMRV EVGTGFVQLT YTKIFILVAA FVGMGLLTYV IKYTKLGRMC
RATQQDRKMA SILGINTDRV ISYVFVIGAV MAALAGVLIT MNYGTFDFYA GFIIGIKAFT
AAVLGGIGSL PGAMLGGIIL GISESLFSGL INSDYKDVFS FSLLVMILIF RPQGLLGRPL
VAKV