| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4914 |
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| Symbol | |
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| ID | 5872727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5480603 |
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| End bp | 5482669 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641550050 |
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| Product | AsmA family protein |
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| Protein accession | YP_001671134 |
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| Protein GI | 167035903 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000000550525 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGCGTC CCGCCAGAAT TCTCGTCTGG ACCCTCACCA GCCTGTTCAC CCTGCTGGCA
ATCCTGGTGG TGGTGATCGC CACCTTCGAC TGGAACCGCG TCAAGCCGCT GCTCAACGAG
AAGGTCTCCG AGGCCTTGCA CCGGCCTTTC GCAATCAATG GCAACCTCGC TGTGCATTGG
CGTACCGAGC CCGAAGAGGG CGGCTGGCGT GCCTGGGTGC CGTGGCCGCA CTTCATTGCC
GAGGACCTGA CCTTGGGCAA CCCGGAGTGG CTCAAGGAGC CTGATATGGT CGGCCTGGCG
CGCGTGGAGT TCCGCCTGGC GCCGCTACCG CTGGTGTTCC AGCAGATCAG CATCCCCCGC
ATCAACCTTA CCAAGCCTAC CGCCAACCTC ACCCGCCTGG CCGATGGCCG CGCTAACTGG
GTGTTCGACT TCGGCCCCAA GGATGAAAAC GCAGAACCTT CAAAGTGGCA GTTGGATATT
GGCGCCATCG GCTTCGACCA GGGCAACGTC AGCTTCGACG ACCAGACACT GAAAACCAGC
ATGAAGGTGC AGATCGACCC GCTGGGCAAG CCAATCCCGT TCAGCGACAT TGTCGGCAAG
GCCAGCGCCG AGAAGGCTGG CGCTGCGCAG GACTATGCCT TCGGCCTCAA GGCCCAGGGC
CGCTACAAAG GCCAGCCAGT GTCCGGCACT GGCAAGATCG GCGGCCTGCT GGCGCTGCAG
GACGCCAGCC AGCCGTTCCC GCTGCAGGCC GATGTGCGCA TCGCCGACAC CCACGTGGTG
CTAGCCGGCA CCCTGACCGA CCCGCGCAAC CTCGGCGCCC TCGACCTGCG CTTGCGCCTG
TCGGGTGCCA GCTTGGGCAA CCTCTACCCG TTGACCGGGG TAACCCTGCC GGACACGCCG
GCCTACTCCA CCGATGGCCG CCTCAGCGCC AACCTGCACG CGGCGCAAGG GGCGTCGTTC
AATTACCAGG GCTTCAACGG CAAGATCGGC GACAGCGATA TTCACGGTGA CCTGGCCTTC
GTCGCCAGCC AGCCACGGCC CAAACTGTCC GGCAAACTGG TATCGAACCA GTTACTGTTC
AAAGACCTGG CGCCGCTGAT CGGCGCCGAT TCCAACGCCG AGCAGAAGGC CCGGGGTGGT
GCCAGCAAGC AGCCGACGGG CAAGGTGCTA CCGGTTGAAG AGTTCCGCAC CGAGCGCTGG
CGCGCGATGG ATGCTGACGT CACTTTTGCT GGCAAGCGCA TCGTGCACAG CACGCAACTG
CCGTTCAATG ACCTGTCGGC CCACGTGATA CTCGATGACG GCCTGCTGCG CCTGGAGCCC
CTGCGTTTTG GCGTGGCCGG TGGCAGCCTG GCCTCCAATA TCCGCCTTGA CGGGCGCAGC
GTGCCCTTGC AGGGCCGGGC ACAGTTGACG GCACGGGGTT TCAAGCTCAA GCAACTGTTC
CCCACGTTTG CGCCGATGCA GACCAGCTTT GGCGAATTGA ACGGCGATGC CGACATCACG
GGCCGTGGCA ACTCGGTGGC AGCCTTGCTG GGTACGGCCA ATGGCGACCT GCGCATGCTG
ATCAACGATG GCGCCATCAG CCGCAGCCTG ATGGAGATTG CCGGTTTGAA CGTGGGCAAC
TATGTGGTCG GCAAGCTGTT CGGTGATGAG GACGTGAAGA TCAACTGCGC GGCAGCCGAT
GTGGGTATCA AGGATGGCCT GGCGACTACG CGGCTGTTCA TCTTCGATAC CGAGAACGCG
ATCATCTACA TCAACGGCAC CGCCAATTTT GCCTCCGAGC AGTTGGACTT GAAGATCACC
CCGGAGTCGA AAGGGCTGCG GTTGTTCTCG CTGCGCTCGC CGTTGTACGT GCGTGGACCG
TTTGCCAAAC CGAGTGCCGG TGTGCAGGCG CTGCCGCTGG CGTTGCGCGG CGCGGGAATG
GTGGCGCTGG GTGTGGTGGC CGGGCCGGCG GCAGGGTTGC TGGCACTGAT TGCGCCCAGC
AGCGGGGATG ATCCAAACCA GTGCACGCCG TTGTTGCAGC AGATGAAAGC GGGCAAGGCA
CCGGCGGCGG TGAAAGGGCG GAAATAG
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| Protein sequence | MTRPARILVW TLTSLFTLLA ILVVVIATFD WNRVKPLLNE KVSEALHRPF AINGNLAVHW
RTEPEEGGWR AWVPWPHFIA EDLTLGNPEW LKEPDMVGLA RVEFRLAPLP LVFQQISIPR
INLTKPTANL TRLADGRANW VFDFGPKDEN AEPSKWQLDI GAIGFDQGNV SFDDQTLKTS
MKVQIDPLGK PIPFSDIVGK ASAEKAGAAQ DYAFGLKAQG RYKGQPVSGT GKIGGLLALQ
DASQPFPLQA DVRIADTHVV LAGTLTDPRN LGALDLRLRL SGASLGNLYP LTGVTLPDTP
AYSTDGRLSA NLHAAQGASF NYQGFNGKIG DSDIHGDLAF VASQPRPKLS GKLVSNQLLF
KDLAPLIGAD SNAEQKARGG ASKQPTGKVL PVEEFRTERW RAMDADVTFA GKRIVHSTQL
PFNDLSAHVI LDDGLLRLEP LRFGVAGGSL ASNIRLDGRS VPLQGRAQLT ARGFKLKQLF
PTFAPMQTSF GELNGDADIT GRGNSVAALL GTANGDLRML INDGAISRSL MEIAGLNVGN
YVVGKLFGDE DVKINCAAAD VGIKDGLATT RLFIFDTENA IIYINGTANF ASEQLDLKIT
PESKGLRLFS LRSPLYVRGP FAKPSAGVQA LPLALRGAGM VALGVVAGPA AGLLALIAPS
SGDDPNQCTP LLQQMKAGKA PAAVKGRK
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