| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4909 |
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| Symbol | |
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| ID | 5872722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5476750 |
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| End bp | 5477538 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641550045 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001671129 |
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| Protein GI | 167035898 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000033682 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGCGCA AATACCTGGA CATCCCTCAG TTCACCCAGC TCCCGGCCCC GGTGTACTTC
CGCCACGATG AGTTCGTTGC CGACACCCAC AGCGCCGTGC ACTGCCACGC CTGGGGTCAA
CTGAACTACA CCGCTCACGG CGTGATGCAT CTGGACGTTG CCGGCCAGCG CTTCCTGTCA
CCGCCAAGCT ACGCCGTGTG GGTGCCGCCC GACACCGCGC ATGGTTGCTA CAACCCGCAG
GCCATCGTCT ACCGCTCCAT CTACCTCGAC CGCAGCCTGT GCGCCGCGCT GCCACGGCAA
CCGTGCAGCT TGATGATCAG TGACATTCTC AAGGCCATCC TCGCCGACTT CGCCCGCCGC
GACCTCAAGG TGGCCGAAGA CCCGCGCGAC CAACGCCTGG TGCAGGTTCT GCTCGATCAA
TTGCTGCTGG CACCCACCCA GGCCTGCTAC CTGCCGTTTG CCCACAGCGA TGGCTTGCGC
CAGGTGCTCG AAGCGCTCAG CGCCGAGCCT GGCGACAACC GCCCGTTGGC CGACTGGGCT
GCCCGAGTGC ATGTCAGCGA ACGCACCCTG GCCCGCCAGT TTCTGCGCGA ATTGGGCATC
AGTTTTGGCG AATGGCGCTT GCGCCTGCGT TTTTTGCGCG CCATCGAAGC GCTGGAAGCT
GGCCTGCCGA TTCAGGCCAT CGCCTTCGAC CTGGGCTACA GCAGCGCTTC GGCGTTCATC
GCCATGTTCC AGCGCCAGGC CCAATGCACG CCCGAGCAAT ACCGCCGGCA GGCGCGGGCG
GGGCGCTGA
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| Protein sequence | MPRKYLDIPQ FTQLPAPVYF RHDEFVADTH SAVHCHAWGQ LNYTAHGVMH LDVAGQRFLS
PPSYAVWVPP DTAHGCYNPQ AIVYRSIYLD RSLCAALPRQ PCSLMISDIL KAILADFARR
DLKVAEDPRD QRLVQVLLDQ LLLAPTQACY LPFAHSDGLR QVLEALSAEP GDNRPLADWA
ARVHVSERTL ARQFLRELGI SFGEWRLRLR FLRAIEALEA GLPIQAIAFD LGYSSASAFI
AMFQRQAQCT PEQYRRQARA GR
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